RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
PRKCH-224ENST00000557473 FOXC1Q12948 553 aa9.22□□□□□ -0.93
PRKCH-224ENST00000557473 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-224ENST00000557473 KRI1Q8N9T8 703 aaKnown RBP9.22□□□□□ -0.93
PRKCH-224ENST00000557473 SYNMO15061 1565 aa9.21□□□□□ -0.93
PRKCH-224ENST00000557473 KDM4AO75164 1064 aa9.21□□□□□ -0.94
PRKCH-224ENST00000557473 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
PRKCH-224ENST00000557473 CEP152O94986 1710 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 ABCC5O15440 1437 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 ARHGAP23Q9P227 1491 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 SLIT1O75093 1534 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
PRKCH-224ENST00000557473 UBR1Q8IWV7 1749 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 TOM1O60784 492 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 PKDCCQ504Y2 493 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 SCAF11Q99590 1463 aaKnown RBP9.19□□□□□ -0.94
PRKCH-224ENST00000557473 PTPN23Q9H3S7 1636 aa9.19□□□□□ -0.94
PRKCH-224ENST00000557473 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
PRKCH-224ENST00000557473 DAPK1P53355 1430 aa9.18□□□□□ -0.94
PRKCH-224ENST00000557473 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
PRKCH-224ENST00000557473 LMTK2Q8IWU2 1503 aa9.18□□□□□ -0.94
PRKCH-224ENST00000557473 KDM5AP29375 1690 aaKnown RBP9.17□□□□□ -0.94
PRKCH-224ENST00000557473 MED1Q15648 1581 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-224ENST00000557473 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
PRKCH-224ENST00000557473 CLCN1P35523 988 aa9.17□□□□□ -0.94
PRKCH-224ENST00000557473 STRCP1A6NGW2 1772 aa9.17□□□□□ -0.94
PRKCH-224ENST00000557473 HOXA2O43364 376 aa9.16□□□□□ -0.94
PRKCH-224ENST00000557473 GDF9O60383 454 aa9.16□□□□□ -0.94
PRKCH-224ENST00000557473 HSPA1LP34931 641 aa9.16□□□□□ -0.94
PRKCH-224ENST00000557473 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-224ENST00000557473 Q3C1V9 767 aa9.16□□□□□ -0.94
PRKCH-224ENST00000557473 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
PRKCH-224ENST00000557473 REPIN1Q9BWE0 567 aaKnown RBP9.16□□□□□ -0.94
PRKCH-224ENST00000557473 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-224ENST00000557473 ADGRL2O95490 1459 aa9.15□□□□□ -0.95
PRKCH-224ENST00000557473 KANK1Q14678 1352 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 ANKRD30AQ9BXX3 1397 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PIK3C2BO00750 1634 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PRR20EP86478 221 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PRR20CP86479 221 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PRR20DP86480 221 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PRR20BP86481 221 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PRR20AP86496 221 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 SYMPKQ92797 1274 aaKnown RBP9.14□□□□□ -0.95
PRKCH-224ENST00000557473 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
PRKCH-224ENST00000557473 EFCAB6Q5THR3 1501 aa9.14□□□□□ -0.95
PRKCH-224ENST00000557473 TMEM2Q9UHN6 1383 aa9.13□□□□□ -0.95
PRKCH-224ENST00000557473 ZBTB24O43167 697 aaPredicted RBP9.13□□□□□ -0.95
PRKCH-224ENST00000557473 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
PRKCH-224ENST00000557473 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
PRKCH-224ENST00000557473 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
PRKCH-224ENST00000557473 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
PRKCH-224ENST00000557473 NOS1P29475 1434 aa9.13□□□□□ -0.95
PRKCH-224ENST00000557473 LTKP29376 864 aa9.12□□□□□ -0.95
PRKCH-224ENST00000557473 RPIAP49247 311 aa9.12□□□□□ -0.95
PRKCH-224ENST00000557473 USP46P62068 366 aa9.12□□□□□ -0.95
PRKCH-224ENST00000557473 ZNF787Q6DD87 383 aa9.12□□□□□ -0.95
PRKCH-224ENST00000557473 RRP7BPQ9NSQ0 103 aa9.12□□□□□ -0.95
PRKCH-224ENST00000557473 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
PRKCH-224ENST00000557473 RPRD2Q5VT52 1461 aaKnown RBP9.11□□□□□ -0.95
PRKCH-224ENST00000557473 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
PRKCH-224ENST00000557473 CD2BP2O95400 341 aaKnown RBP9.11□□□□□ -0.95
PRKCH-224ENST00000557473 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
PRKCH-224ENST00000557473 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
PRKCH-224ENST00000557473 EID1Q9Y6B2 187 aa9.11□□□□□ -0.95
PRKCH-224ENST00000557473 ZMYND10O75800 440 aa9.1□□□□□ -0.95
PRKCH-224ENST00000557473 DGAT1O75907 488 aa9.1□□□□□ -0.95
PRKCH-224ENST00000557473 TET3O43151 1660 aa9.1□□□□□ -0.95
PRKCH-224ENST00000557473 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
PRKCH-224ENST00000557473 NWD1Q149M9 1564 aa9.09□□□□□ -0.95
PRKCH-224ENST00000557473 SSTR3P32745 418 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-224ENST00000557473 MMP16P51512 607 aa9.09□□□□□ -0.95
PRKCH-224ENST00000557473 XIRP1Q702N8 1843 aaKnown RBP9.09□□□□□ -0.95
PRKCH-224ENST00000557473 NKTRP30414 1462 aaKnown RBP9.08□□□□□ -0.96
PRKCH-224ENST00000557473 ANKRD50Q9ULJ7 1429 aa9.08□□□□□ -0.96
PRKCH-224ENST00000557473 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
PRKCH-224ENST00000557473 TRIM32Q13049 653 aa9.08□□□□□ -0.96
PRKCH-224ENST00000557473 IDI1Q13907 227 aa9.08□□□□□ -0.96
PRKCH-224ENST00000557473 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
PRKCH-224ENST00000557473 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
PRKCH-224ENST00000557473 FAM135BQ49AJ0 1406 aa9.07□□□□□ -0.96
PRKCH-224ENST00000557473 C6orf229H3BNL8 230 aa9.07□□□□□ -0.96
PRKCH-224ENST00000557473 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
PRKCH-224ENST00000557473 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
PRKCH-224ENST00000557473 UNC13BO14795 1591 aa9.07□□□□□ -0.96
PRKCH-224ENST00000557473 ZFYVE9O95405 1425 aa9.06□□□□□ -0.96
PRKCH-224ENST00000557473 POTECB2RU33 542 aa9.06□□□□□ -0.96
PRKCH-224ENST00000557473 FDX1P10109 184 aa9.06□□□□□ -0.96
PRKCH-224ENST00000557473 NDUFV2P19404 249 aa9.06□□□□□ -0.96
PRKCH-224ENST00000557473 PCDHGC3Q9UN70 934 aa9.06□□□□□ -0.96
PRKCH-224ENST00000557473 TMEM94Q12767 1356 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms