RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 RREB1Q92766 1687 aa26.85■■□□□ 1.89
HIF1A-211ENST00000557446 RGPD3A6NKT7 1758 aaPredicted RBP26.84■■□□□ 1.89
HIF1A-211ENST00000557446 RGPD4Q7Z3J3 1758 aa26.84■■□□□ 1.89
HIF1A-211ENST00000557446 ZCRB1Q8TBF4 217 aaKnown RBP26.84■■□□□ 1.89
HIF1A-211ENST00000557446 DDX54Q8TDD1 881 aaKnown RBP26.84■■□□□ 1.89
HIF1A-211ENST00000557446 DOT1LQ8TEK3 1739 aa26.84■■□□□ 1.89
HIF1A-211ENST00000557446 MTHFSP49914 203 aa26.81■■□□□ 1.88
HIF1A-211ENST00000557446 BCL11BQ9C0K0 894 aaPredicted RBP26.81■■□□□ 1.88
HIF1A-211ENST00000557446 IGSF1Q8N6C5 1336 aa26.81■■□□□ 1.88
HIF1A-211ENST00000557446 PTF1AQ7RTS3 328 aa26.8■■□□□ 1.88
HIF1A-211ENST00000557446 PARD3Q8TEW0 1356 aa26.8■■□□□ 1.88
HIF1A-211ENST00000557446 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
HIF1A-211ENST00000557446 EZH2Q15910 746 aaKnown RBP26.79■■□□□ 1.88
HIF1A-211ENST00000557446 ACSBG1Q96GR2 724 aa26.79■■□□□ 1.88
HIF1A-211ENST00000557446 BTAF1O14981 1849 aa26.79■■□□□ 1.88
HIF1A-211ENST00000557446 KAT6BQ8WYB5 2073 aa26.78■■□□□ 1.88
HIF1A-211ENST00000557446 CAMKK2Q96RR4 588 aa26.78■■□□□ 1.88
HIF1A-211ENST00000557446 PCDH11XQ9BZA7 1347 aa26.78■■□□□ 1.88
HIF1A-211ENST00000557446 PCDH11YQ9BZA8 1340 aa26.78■■□□□ 1.88
HIF1A-211ENST00000557446 KCNQ2O43526 872 aa26.76■■□□□ 1.87
HIF1A-211ENST00000557446 IL13P35225 146 aa26.74■■□□□ 1.87
HIF1A-211ENST00000557446 COL3A1P02461 1466 aaPredicted RBP26.74■■□□□ 1.87
HIF1A-211ENST00000557446 PLEKHG2Q9H7P9 1386 aa26.72■■□□□ 1.87
HIF1A-211ENST00000557446 TOGARAM1Q9Y4F4 1720 aa26.72■■□□□ 1.87
HIF1A-211ENST00000557446 SPG7Q9UQ90 795 aa26.71■■□□□ 1.87
HIF1A-211ENST00000557446 PLSCR1O15162 318 aa26.7■■□□□ 1.86
HIF1A-211ENST00000557446 CYP27B1O15528 508 aa26.69■■□□□ 1.86
HIF1A-211ENST00000557446 AEBP1Q8IUX7 1158 aa26.69■■□□□ 1.86
HIF1A-211ENST00000557446 SYTL4Q96C24 671 aaPredicted RBP26.68■■□□□ 1.86
HIF1A-211ENST00000557446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.68■■□□□ 1.869e-7■■□□□ 12.1
HIF1A-211ENST00000557446 KDRP35968 1356 aa26.68■■□□□ 1.86
HIF1A-211ENST00000557446 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
HIF1A-211ENST00000557446 DDX10Q13206 875 aaKnown RBP26.67■■□□□ 1.86
HIF1A-211ENST00000557446 SULT6B1Q6IMI4 303 aa26.67■■□□□ 1.86
HIF1A-211ENST00000557446 ITGB4P16144 1822 aa26.66■■□□□ 1.86
HIF1A-211ENST00000557446 PPP2R1AP30153 589 aa26.65■■□□□ 1.86
HIF1A-211ENST00000557446 PRIM1P49642 420 aaKnown RBP26.65■■□□□ 1.86
HIF1A-211ENST00000557446 CFAP53Q96M91 514 aa26.62■■□□□ 1.85
HIF1A-211ENST00000557446 LY75O60449 1722 aa26.62■■□□□ 1.85
HIF1A-211ENST00000557446 PSDA5PKW4 1024 aaPredicted RBP26.61■■□□□ 1.85
HIF1A-211ENST00000557446 PHKG2P15735 406 aa26.61■■□□□ 1.85
HIF1A-211ENST00000557446 TXNRD1Q16881 649 aa26.61■■□□□ 1.85
HIF1A-211ENST00000557446 PLEKHO1Q53GL0 409 aaPredicted RBP26.61■■□□□ 1.85
HIF1A-211ENST00000557446 IFNL2Q8IZJ0 200 aa26.61■■□□□ 1.85
HIF1A-211ENST00000557446 HMOX1P09601 288 aa26.6■■□□□ 1.85
HIF1A-211ENST00000557446 NKX1-1Q15270 411 aaPredicted RBP26.6■■□□□ 1.85
HIF1A-211ENST00000557446 AMOTQ4VCS5 1084 aa26.59■■□□□ 1.85
HIF1A-211ENST00000557446 PROM2Q8N271 834 aa26.59■■□□□ 1.85
HIF1A-211ENST00000557446 U2SURPO15042 1029 aaKnown RBP26.58■■□□□ 1.85
HIF1A-211ENST00000557446 R3HDM1Q15032 1099 aaKnown RBP26.58■■□□□ 1.85
HIF1A-211ENST00000557446 NBPF14Q5TI25 921 aa26.58■■□□□ 1.85
HIF1A-211ENST00000557446 ZNF530Q6P9A1 599 aaPredicted RBP26.58■■□□□ 1.85
HIF1A-211ENST00000557446 PAPPAQ13219 1627 aa26.57■■□□□ 1.84
HIF1A-211ENST00000557446 MPRIPQ6WCQ1 1025 aa26.54■■□□□ 1.84
HIF1A-211ENST00000557446 ANO8Q9HCE9 1232 aaPredicted RBP26.54■■□□□ 1.84
HIF1A-211ENST00000557446 VIRMAQ69YN4 1812 aaKnown RBP26.53■■□□□ 1.84
HIF1A-211ENST00000557446 KDM6AO15550 1401 aaPredicted RBP26.52■■□□□ 1.84
HIF1A-211ENST00000557446 HSP90AB1P08238 724 aaKnown RBP26.52■■□□□ 1.84
HIF1A-211ENST00000557446 C1orf141Q5JVX7 400 aa26.52■■□□□ 1.84
HIF1A-211ENST00000557446 SCN11AQ9UI33 1791 aa26.52■■□□□ 1.84
HIF1A-211ENST00000557446 NUDCQ9Y266 331 aa26.51■■□□□ 1.83
HIF1A-211ENST00000557446 RALBP1Q15311 655 aa26.5■■□□□ 1.83
HIF1A-211ENST00000557446 PALLDQ8WX93 1383 aa26.49■■□□□ 1.83
HIF1A-211ENST00000557446 SLC27A3Q5K4L6 730 aa26.49■■□□□ 1.83
HIF1A-211ENST00000557446 DCAF5Q96JK2 942 aa26.49■■□□□ 1.83
HIF1A-211ENST00000557446 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
HIF1A-211ENST00000557446 PIGBQ92521 554 aa26.48■■□□□ 1.83
HIF1A-211ENST00000557446 LRRC4BQ9NT99 713 aa26.48■■□□□ 1.83
HIF1A-211ENST00000557446 LRP5O75197 1615 aa26.47■■□□□ 1.83
HIF1A-211ENST00000557446 C5P01031 1676 aa26.47■■□□□ 1.83
HIF1A-211ENST00000557446 CASZ1Q86V15 1759 aa26.46■■□□□ 1.83
HIF1A-211ENST00000557446 ZNF316A6NFI3 1004 aaPredicted RBP26.46■■□□□ 1.83
HIF1A-211ENST00000557446 STK32BQ9NY57 414 aa26.46■■□□□ 1.83
HIF1A-211ENST00000557446 TAF1LQ8IZX4 1826 aa26.45■■□□□ 1.82
HIF1A-211ENST00000557446 U2AF1L5P0DN76 240 aaPredicted RBP26.45■■□□□ 1.82
HIF1A-211ENST00000557446 KCNQ4P56696 695 aa26.45■■□□□ 1.82
HIF1A-211ENST00000557446 U2AF1Q01081 240 aaKnown RBP eCLIP26.45■■□□□ 1.823e-6■■■■□ 23.3
HIF1A-211ENST00000557446 MTHFSDQ2M296 383 aaKnown RBP26.45■■□□□ 1.82
HIF1A-211ENST00000557446 AKAP4Q5JQC9 854 aa26.45■■□□□ 1.82
HIF1A-211ENST00000557446 CCNL1Q9UK58 526 aaPredicted RBP26.45■■□□□ 1.82
HIF1A-211ENST00000557446 ERVV-2B6SEH9 535 aa26.44■■□□□ 1.82
HIF1A-211ENST00000557446 SMARCC1Q92922 1105 aaPredicted RBP26.44■■□□□ 1.82
HIF1A-211ENST00000557446 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
HIF1A-211ENST00000557446 ADAMTS7Q9UKP4 1686 aa26.44■■□□□ 1.82
HIF1A-211ENST00000557446 PRKAR2BP31323 418 aa26.43■■□□□ 1.82
HIF1A-211ENST00000557446 SLC15A2Q16348 729 aa26.43■■□□□ 1.82
HIF1A-211ENST00000557446 TUBGCP6Q96RT7 1819 aa26.43■■□□□ 1.82
HIF1A-211ENST00000557446 QSER1Q2KHR3 1735 aa26.42■■□□□ 1.82
HIF1A-211ENST00000557446 MYBBP1AQ9BQG0 1328 aaKnown RBP26.42■■□□□ 1.82
HIF1A-211ENST00000557446 CABP4P57796 275 aa26.41■■□□□ 1.82
HIF1A-211ENST00000557446 ZNF827Q17R98 1081 aa26.4■■□□□ 1.82
HIF1A-211ENST00000557446 MRC1P22897 1456 aa26.4■■□□□ 1.82
HIF1A-211ENST00000557446 GAS2L2Q8NHY3 880 aa26.39■■□□□ 1.82
HIF1A-211ENST00000557446 ASAP1Q9ULH1 1129 aa26.39■■□□□ 1.82
HIF1A-211ENST00000557446 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
HIF1A-211ENST00000557446 ATG3Q9NT62 314 aa26.37■■□□□ 1.81
HIF1A-211ENST00000557446 C4BP0C0L5 1744 aa26.36■■□□□ 1.81
HIF1A-211ENST00000557446 FCHSD2O94868 740 aa26.36■■□□□ 1.81
HIF1A-211ENST00000557446 AKT1S1Q96B36 256 aa26.36■■□□□ 1.81
HIF1A-211ENST00000557446 PRKRIP1Q9H875 184 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1251.2 ms