RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 EXOC5O00471 708 aa14.32□□□□□ -0.12
HNRNPC-232ENST00000557442 RGPD3A6NKT7 1758 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-232ENST00000557442 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
HNRNPC-232ENST00000557442 PARD3Q8TEW0 1356 aa14.31□□□□□ -0.12
HNRNPC-232ENST00000557442 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
HNRNPC-232ENST00000557442 EYA1Q99502 592 aa14.31□□□□□ -0.12
HNRNPC-232ENST00000557442 TOGARAM1Q9Y4F4 1720 aa14.3□□□□□ -0.12
HNRNPC-232ENST00000557442 FAM196AQ6ZSG2 479 aa14.3□□□□□ -0.12
HNRNPC-232ENST00000557442 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
HNRNPC-232ENST00000557442 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-232ENST00000557442 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-232ENST00000557442 RREB1Q92766 1687 aa14.28□□□□□ -0.12
HNRNPC-232ENST00000557442 PPP2R1AP30153 589 aa14.28□□□□□ -0.12
HNRNPC-232ENST00000557442 IL13P35225 146 aa14.27□□□□□ -0.12
HNRNPC-232ENST00000557442 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.12
HNRNPC-232ENST00000557442 CCDC125Q86Z20 511 aa14.27□□□□□ -0.12
HNRNPC-232ENST00000557442 BCL9O00512 1426 aa14.27□□□□□ -0.13
HNRNPC-232ENST00000557442 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 TRIM37O94972 964 aa14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 SCN11AQ9UI33 1791 aa14.26□□□□□ -0.13
HNRNPC-232ENST00000557442 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-232ENST00000557442 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
HNRNPC-232ENST00000557442 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
HNRNPC-232ENST00000557442 KDRP35968 1356 aa14.25□□□□□ -0.13
HNRNPC-232ENST00000557442 RALBP1Q15311 655 aa14.24□□□□□ -0.13
HNRNPC-232ENST00000557442 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
HNRNPC-232ENST00000557442 PLEKHG2Q9H7P9 1386 aa14.24□□□□□ -0.13
HNRNPC-232ENST00000557442 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
HNRNPC-232ENST00000557442 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
HNRNPC-232ENST00000557442 SULT6B1Q6IMI4 303 aa14.23□□□□□ -0.13
HNRNPC-232ENST00000557442 LY75O60449 1722 aa14.22□□□□□ -0.13
HNRNPC-232ENST00000557442 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-232ENST00000557442 BAG6P46379 1132 aa14.22□□□□□ -0.13
HNRNPC-232ENST00000557442 SPG7Q9UQ90 795 aa14.22□□□□□ -0.13
HNRNPC-232ENST00000557442 HMOX1P09601 288 aa14.21□□□□□ -0.13
HNRNPC-232ENST00000557442 DEFB132Q7Z7B7 95 aa14.21□□□□□ -0.13
HNRNPC-232ENST00000557442 MYBBP1AQ9BQG0 1328 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-232ENST00000557442 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
HNRNPC-232ENST00000557442 CYP27B1O15528 508 aa14.19□□□□□ -0.14
HNRNPC-232ENST00000557442 APBA3O96018 575 aa14.19□□□□□ -0.14
HNRNPC-232ENST00000557442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.144e-12■■■□□ 16.5
HNRNPC-232ENST00000557442 PTF1AQ7RTS3 328 aa14.18□□□□□ -0.14
HNRNPC-232ENST00000557442 BCL11BQ9C0K0 894 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-232ENST00000557442 PRKRIP1Q9H875 184 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-232ENST00000557442 NUDCQ9Y266 331 aa14.18□□□□□ -0.14
HNRNPC-232ENST00000557442 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
HNRNPC-232ENST00000557442 KCNQ2O43526 872 aa14.17□□□□□ -0.14
HNRNPC-232ENST00000557442 EN1Q05925 392 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-232ENST00000557442 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-232ENST00000557442 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-232ENST00000557442 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
HNRNPC-232ENST00000557442 AMOTQ4VCS5 1084 aa14.16□□□□□ -0.14
HNRNPC-232ENST00000557442 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
HNRNPC-232ENST00000557442 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
HNRNPC-232ENST00000557442 SIPA1L3O60292 1781 aaPredicted RBP14.16□□□□□ -0.14
HNRNPC-232ENST00000557442 C5P01031 1676 aa14.16□□□□□ -0.14
HNRNPC-232ENST00000557442 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
HNRNPC-232ENST00000557442 PHKG2P15735 406 aa14.15□□□□□ -0.14
HNRNPC-232ENST00000557442 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.146e-11■■□□□ 14.2
HNRNPC-232ENST00000557442 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.15
HNRNPC-232ENST00000557442 EZH2Q15910 746 aaKnown RBP14.15□□□□□ -0.15
HNRNPC-232ENST00000557442 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.15
HNRNPC-232ENST00000557442 TUBGCP6Q96RT7 1819 aa14.14□□□□□ -0.15
HNRNPC-232ENST00000557442 KDM6AO15550 1401 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-232ENST00000557442 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-232ENST00000557442 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
HNRNPC-232ENST00000557442 PAPPAQ13219 1627 aa14.13□□□□□ -0.15
HNRNPC-232ENST00000557442 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
HNRNPC-232ENST00000557442 CAMKK2Q96RR4 588 aa14.13□□□□□ -0.15
HNRNPC-232ENST00000557442 PLSCR1O15162 318 aa14.12□□□□□ -0.15
HNRNPC-232ENST00000557442 ANP32CO43423 234 aa14.12□□□□□ -0.15
HNRNPC-232ENST00000557442 HSP90AB1P08238 724 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-232ENST00000557442 QSER1Q2KHR3 1735 aa14.11□□□□□ -0.15
HNRNPC-232ENST00000557442 MRC1P22897 1456 aa14.11□□□□□ -0.15
HNRNPC-232ENST00000557442 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
HNRNPC-232ENST00000557442 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
HNRNPC-232ENST00000557442 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
HNRNPC-232ENST00000557442 UBR2Q8IWV8 1755 aa14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 MAP3K5Q99683 1374 aa14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 FCHSD2O94868 740 aa14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 AKAP4Q5JQC9 854 aa14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
HNRNPC-232ENST00000557442 ZNF831Q5JPB2 1677 aa14.09□□□□□ -0.15
HNRNPC-232ENST00000557442 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
HNRNPC-232ENST00000557442 NEFMP07197 916 aa14.08□□□□□ -0.16
HNRNPC-232ENST00000557442 WDR43Q15061 677 aaKnown RBP eCLIP14.08□□□□□ -0.16
HNRNPC-232ENST00000557442 TXNRD1Q16881 649 aa14.08□□□□□ -0.16
HNRNPC-232ENST00000557442 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
HNRNPC-232ENST00000557442 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 ERVV-2B6SEH9 535 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 TJP1Q07157 1748 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 PIGBQ92521 554 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 CICQ96RK0 1608 aaPredicted RBP14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
HNRNPC-232ENST00000557442 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms