RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
PCNX1-215ENST00000557428 LY75O60449 1722 aa11.58□□□□□ -0.56
PCNX1-215ENST00000557428 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
PCNX1-215ENST00000557428 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
PCNX1-215ENST00000557428 FAM208AQ9UK61 1670 aaKnown RBP11.57□□□□□ -0.56
PCNX1-215ENST00000557428 USP54Q70EL1 1684 aa11.56□□□□□ -0.56
PCNX1-215ENST00000557428 NME9Q86XW9 330 aa11.56□□□□□ -0.56
PCNX1-215ENST00000557428 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
PCNX1-215ENST00000557428 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
PCNX1-215ENST00000557428 ZBTB22O15209 634 aa11.55□□□□□ -0.56
PCNX1-215ENST00000557428 HSPA6P17066 643 aa11.55□□□□□ -0.56
PCNX1-215ENST00000557428 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
PCNX1-215ENST00000557428 C5P01031 1676 aa11.55□□□□□ -0.56
PCNX1-215ENST00000557428 PRIM1P49642 420 aaKnown RBP11.54□□□□□ -0.56
PCNX1-215ENST00000557428 TMC1Q8TDI8 760 aa11.54□□□□□ -0.56
PCNX1-215ENST00000557428 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
PCNX1-215ENST00000557428 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
PCNX1-215ENST00000557428 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
PCNX1-215ENST00000557428 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
PCNX1-215ENST00000557428 USP31Q70CQ4 1352 aa11.52□□□□□ -0.57
PCNX1-215ENST00000557428 USP47Q96K76 1375 aa11.52□□□□□ -0.57
PCNX1-215ENST00000557428 HDGFL2Q7Z4V5 671 aaPredicted RBP11.51□□□□□ -0.57
PCNX1-215ENST00000557428 NSD2O96028 1365 aa11.51□□□□□ -0.57
PCNX1-215ENST00000557428 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
PCNX1-215ENST00000557428 ADCY9O60503 1353 aa11.49□□□□□ -0.57
PCNX1-215ENST00000557428 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
PCNX1-215ENST00000557428 MEGF6O75095 1541 aa11.49□□□□□ -0.57
PCNX1-215ENST00000557428 PHF14O94880 888 aa11.48□□□□□ -0.57
PCNX1-215ENST00000557428 ZCRB1Q8TBF4 217 aaKnown RBP11.48□□□□□ -0.57
PCNX1-215ENST00000557428 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
PCNX1-215ENST00000557428 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
PCNX1-215ENST00000557428 IGSF1Q8N6C5 1336 aa11.48□□□□□ -0.57
PCNX1-215ENST00000557428 EDC4Q6P2E9 1401 aaKnown RBP11.48□□□□□ -0.57
PCNX1-215ENST00000557428 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
PCNX1-215ENST00000557428 AMPHP49418 695 aa11.47□□□□□ -0.57
PCNX1-215ENST00000557428 IP6K1Q92551 441 aa11.47□□□□□ -0.57
PCNX1-215ENST00000557428 C4BP0C0L5 1744 aa11.46□□□□□ -0.57
PCNX1-215ENST00000557428 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
PCNX1-215ENST00000557428 AK7Q96M32 723 aa11.46□□□□□ -0.57
PCNX1-215ENST00000557428 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
PCNX1-215ENST00000557428 CAPN15O75808 1086 aa11.45□□□□□ -0.58
PCNX1-215ENST00000557428 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
PCNX1-215ENST00000557428 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
PCNX1-215ENST00000557428 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
PCNX1-215ENST00000557428 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 ITGB4P16144 1822 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 PALLDQ8WX93 1383 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 HOXC9P31274 260 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 APLP1P51693 650 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 FLAD1Q8NFF5 587 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
PCNX1-215ENST00000557428 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 MAP3K19Q56UN5 1328 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 KIF3CO14782 793 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 FBLN1P23142 703 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 COG3Q96JB2 828 aa11.43□□□□□ -0.58
PCNX1-215ENST00000557428 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
PCNX1-215ENST00000557428 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
PCNX1-215ENST00000557428 SIN3AQ96ST3 1273 aa11.42□□□□□ -0.58
PCNX1-215ENST00000557428 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
PCNX1-215ENST00000557428 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
PCNX1-215ENST00000557428 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
PCNX1-215ENST00000557428 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
PCNX1-215ENST00000557428 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
PCNX1-215ENST00000557428 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
PCNX1-215ENST00000557428 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
PCNX1-215ENST00000557428 NSD3Q9BZ95 1437 aa11.4□□□□□ -0.58
PCNX1-215ENST00000557428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
PCNX1-215ENST00000557428 NBPF6Q5VWK0 638 aa11.39□□□□□ -0.59
PCNX1-215ENST00000557428 C16orf71Q8IYS4 520 aaPredicted RBP11.39□□□□□ -0.59
PCNX1-215ENST00000557428 NBPF4Q96M43 638 aa11.39□□□□□ -0.59
PCNX1-215ENST00000557428 BCS1LQ9Y276 419 aa11.39□□□□□ -0.59
PCNX1-215ENST00000557428 RTL1A6NKG5 1358 aa11.39□□□□□ -0.59
PCNX1-215ENST00000557428 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
PCNX1-215ENST00000557428 HTRA3P83110 453 aa11.38□□□□□ -0.59
PCNX1-215ENST00000557428 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 GNPATO15228 680 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 TOMM70O94826 608 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
PCNX1-215ENST00000557428 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 KIAA1551Q9HCM1 1747 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
PCNX1-215ENST00000557428 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
PCNX1-215ENST00000557428 MMP10P09238 476 aa11.36□□□□□ -0.59
PCNX1-215ENST00000557428 SSFA2P28290 1259 aa11.36□□□□□ -0.59
PCNX1-215ENST00000557428 LINC00116Q8NCU8 138 aa11.36□□□□□ -0.59
PCNX1-215ENST00000557428 KIF13BQ9NQT8 1826 aa11.36□□□□□ -0.59
PCNX1-215ENST00000557428 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
PCNX1-215ENST00000557428 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
PCNX1-215ENST00000557428 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
PCNX1-215ENST00000557428 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
PCNX1-215ENST00000557428 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
PCNX1-215ENST00000557428 FCHSD2O94868 740 aa11.34□□□□□ -0.59
PCNX1-215ENST00000557428 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
PCNX1-215ENST00000557428 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms