RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
SUPT16H-207ENST00000557394 PIBF1Q8WXW3 757 aa12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-207ENST00000557394 TRPM2O94759 1503 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 RABEP1Q15276 862 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 PTPRTO14522 1441 aa12.78□□□□□ -0.36
SUPT16H-207ENST00000557394 CLTCL1P53675 1640 aa12.77□□□□□ -0.36
SUPT16H-207ENST00000557394 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.36
SUPT16H-207ENST00000557394 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.36
SUPT16H-207ENST00000557394 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.36
SUPT16H-207ENST00000557394 KIF3AQ9Y496 699 aa12.77□□□□□ -0.36
SUPT16H-207ENST00000557394 AK9Q5TCS8 1911 aa12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 ADGRB2O60241 1585 aa12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 TSC1Q92574 1164 aa12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 SGSM3Q96HU1 749 aa12.77□□□□□ -0.37
SUPT16H-207ENST00000557394 NOS1P29475 1434 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 SYCE3A1L190 88 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 FOXD4L6Q3SYB3 417 aaPredicted RBP12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 FOXD4L3Q6VB84 417 aaPredicted RBP12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 ERVK-7P63135 1459 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 NPATQ14207 1427 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 PKP1Q13835 747 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
SUPT16H-207ENST00000557394 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-207ENST00000557394 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-207ENST00000557394 ANKRD7Q92527 254 aa12.75□□□□□ -0.37
SUPT16H-207ENST00000557394 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
SUPT16H-207ENST00000557394 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
SUPT16H-207ENST00000557394 MBD3O95983 291 aa12.74□□□□□ -0.37
SUPT16H-207ENST00000557394 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-207ENST00000557394 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
SUPT16H-207ENST00000557394 MROH2AA6NES4 1674 aa12.74□□□□□ -0.37
SUPT16H-207ENST00000557394 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
SUPT16H-207ENST00000557394 CFAP65Q6ZU64 1925 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 MLECQ14165 292 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 FEZ1Q99689 392 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-207ENST00000557394 MED14O60244 1454 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 CDC45O75419 566 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 PSEN1P49768 467 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 EXOC8Q8IYI6 725 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
SUPT16H-207ENST00000557394 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
SUPT16H-207ENST00000557394 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
SUPT16H-207ENST00000557394 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
SUPT16H-207ENST00000557394 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.38
SUPT16H-207ENST00000557394 RNF214Q8ND24 703 aa12.71□□□□□ -0.38
SUPT16H-207ENST00000557394 KIF1BO60333 1816 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 NEURL4Q96JN8 1562 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 GABPB1Q06547 395 aaPredicted RBP12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 OGFRQ9NZT2 677 aa12.7□□□□□ -0.38
SUPT16H-207ENST00000557394 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SUPT16H-207ENST00000557394 ZGPATQ8N5A5 531 aaKnown RBP12.69□□□□□ -0.38
SUPT16H-207ENST00000557394 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
SUPT16H-207ENST00000557394 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
SUPT16H-207ENST00000557394 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■■■■□ 26.7
SUPT16H-207ENST00000557394 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 IL16Q14005 1332 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 SPATA31D1Q6ZQQ2 1576 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
SUPT16H-207ENST00000557394 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 NSD3Q9BZ95 1437 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 SLC20A2Q08357 652 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 SYCP1Q15431 976 aa12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
SUPT16H-207ENST00000557394 GSPT1P15170 499 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms