RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 USP19O94966 1318 aa11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 SOS1Q07889 1333 aaPredicted RBP11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 CRB1P82279 1406 aa11.28□□□□□ -0.6
PPP4R3A-212ENST00000557382 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
PPP4R3A-212ENST00000557382 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
PPP4R3A-212ENST00000557382 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
PPP4R3A-212ENST00000557382 LRRC37A3O60309 1634 aa11.27□□□□□ -0.6
PPP4R3A-212ENST00000557382 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 AMPHP49418 695 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 NUCB1Q02818 461 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 BECN1Q14457 450 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 BABAM1Q9NWV8 329 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 PTPRCP08575 1304 aa11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.61
PPP4R3A-212ENST00000557382 FAM83GA6ND36 823 aa11.26□□□□□ -0.61
PPP4R3A-212ENST00000557382 EIF5BO60841 1220 aaKnown RBP11.26□□□□□ -0.61
PPP4R3A-212ENST00000557382 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
PPP4R3A-212ENST00000557382 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
PPP4R3A-212ENST00000557382 NLRP6P59044 892 aa11.25□□□□□ -0.61
PPP4R3A-212ENST00000557382 RTF1Q92541 710 aaKnown RBP11.25□□□□□ -0.61
PPP4R3A-212ENST00000557382 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
PPP4R3A-212ENST00000557382 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 LTN1O94822 1766 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 HOXC9P31274 260 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 CHD1LQ86WJ1 897 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 EYA1Q99502 592 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
PPP4R3A-212ENST00000557382 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
PPP4R3A-212ENST00000557382 NBR1Q14596 966 aa11.23□□□□□ -0.61
PPP4R3A-212ENST00000557382 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
PPP4R3A-212ENST00000557382 ELL2O00472 640 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 RGS12O14924 1447 aa11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 NPHP4O75161 1426 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 SEC24BO95487 1268 aa11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 MCM10Q7L590 875 aa11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3A-212ENST00000557382 NFAT5O94916 1531 aa11.21□□□□□ -0.61
PPP4R3A-212ENST00000557382 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
PPP4R3A-212ENST00000557382 KCNH5Q8NCM2 988 aa11.21□□□□□ -0.61
PPP4R3A-212ENST00000557382 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 IP6K1Q92551 441 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
PPP4R3A-212ENST00000557382 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
PPP4R3A-212ENST00000557382 SIRT2Q8IXJ6 389 aa11.19□□□□□ -0.62
PPP4R3A-212ENST00000557382 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
PPP4R3A-212ENST00000557382 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
PPP4R3A-212ENST00000557382 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
PPP4R3A-212ENST00000557382 MST1RQ04912 1400 aa11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 SOX12O15370 315 aa11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 DEKP35659 375 aaKnown RBP11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 ANKRD45Q5TZF3 282 aa11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 C22orf23Q9BZE7 217 aa11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 SLIT3O75094 1523 aa11.18□□□□□ -0.62
PPP4R3A-212ENST00000557382 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 LNPKQ9C0E8 428 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 PXDNLA1KZ92 1463 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 LMTK3Q96Q04 1460 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 LMO7Q8WWI1 1683 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
PPP4R3A-212ENST00000557382 MSH6P52701 1360 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 TRPM3Q9HCF6 1732 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 FOXO3O43524 673 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 PSME1Q06323 249 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 CAMTA1Q9Y6Y1 1673 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 OVOS2A0A0G2JMS6 1433 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
PPP4R3A-212ENST00000557382 HMMRO75330 724 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 HOXB7P09629 217 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 NCOA3Q9Y6Q9 1424 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
PPP4R3A-212ENST00000557382 KRT24Q2M2I5 525 aa11.14□□□□□ -0.63
PPP4R3A-212ENST00000557382 ESCO1Q5FWF5 840 aa11.14□□□□□ -0.63
PPP4R3A-212ENST00000557382 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 IL17REQ8NFR9 667 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 SNX21Q969T3 373 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
PPP4R3A-212ENST00000557382 DCCP43146 1447 aa11.12□□□□□ -0.63
PPP4R3A-212ENST00000557382 CDC45O75419 566 aa11.12□□□□□ -0.63
PPP4R3A-212ENST00000557382 GNAI3P08754 354 aa11.12□□□□□ -0.63
PPP4R3A-212ENST00000557382 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms