RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
RIPK3-205ENST00000557253 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
RIPK3-205ENST00000557253 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
RIPK3-205ENST00000557253 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
RIPK3-205ENST00000557253 NSD2O96028 1365 aa13.74□□□□□ -0.21
RIPK3-205ENST00000557253 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
RIPK3-205ENST00000557253 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
RIPK3-205ENST00000557253 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
RIPK3-205ENST00000557253 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
RIPK3-205ENST00000557253 SLC12A5Q9H2X9 1139 aa13.74□□□□□ -0.21
RIPK3-205ENST00000557253 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
RIPK3-205ENST00000557253 IP6K1Q92551 441 aa13.73□□□□□ -0.21
RIPK3-205ENST00000557253 FBLN1P23142 703 aa13.72□□□□□ -0.21
RIPK3-205ENST00000557253 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
RIPK3-205ENST00000557253 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.21
RIPK3-205ENST00000557253 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
RIPK3-205ENST00000557253 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.21
RIPK3-205ENST00000557253 FAM208AQ9UK61 1670 aaKnown RBP13.71□□□□□ -0.21
RIPK3-205ENST00000557253 EDC4Q6P2E9 1401 aaKnown RBP13.71□□□□□ -0.22
RIPK3-205ENST00000557253 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
RIPK3-205ENST00000557253 USP47Q96K76 1375 aa13.7□□□□□ -0.22
RIPK3-205ENST00000557253 HSPA6P17066 643 aa13.69□□□□□ -0.22
RIPK3-205ENST00000557253 MEGF6O75095 1541 aa13.69□□□□□ -0.22
RIPK3-205ENST00000557253 HOXC9P31274 260 aa13.68□□□□□ -0.22
RIPK3-205ENST00000557253 AMPHP49418 695 aa13.68□□□□□ -0.22
RIPK3-205ENST00000557253 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
RIPK3-205ENST00000557253 C5P01031 1676 aa13.68□□□□□ -0.22
RIPK3-205ENST00000557253 MAP3K19Q56UN5 1328 aa13.67□□□□□ -0.22
RIPK3-205ENST00000557253 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
RIPK3-205ENST00000557253 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
RIPK3-205ENST00000557253 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
RIPK3-205ENST00000557253 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
RIPK3-205ENST00000557253 ADCY9O60503 1353 aa13.66□□□□□ -0.22
RIPK3-205ENST00000557253 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
RIPK3-205ENST00000557253 COG3Q96JB2 828 aa13.65□□□□□ -0.22
RIPK3-205ENST00000557253 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
RIPK3-205ENST00000557253 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
RIPK3-205ENST00000557253 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
RIPK3-205ENST00000557253 TAF1LQ8IZX4 1826 aa13.63□□□□□ -0.23
RIPK3-205ENST00000557253 PHF14O94880 888 aa13.63□□□□□ -0.23
RIPK3-205ENST00000557253 RRS1Q15050 365 aaKnown RBP13.63□□□□□ -0.23
RIPK3-205ENST00000557253 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
RIPK3-205ENST00000557253 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
RIPK3-205ENST00000557253 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
RIPK3-205ENST00000557253 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
RIPK3-205ENST00000557253 KIF3CO14782 793 aa13.61□□□□□ -0.23
RIPK3-205ENST00000557253 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
RIPK3-205ENST00000557253 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
RIPK3-205ENST00000557253 AK7Q96M32 723 aa13.61□□□□□ -0.23
RIPK3-205ENST00000557253 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
RIPK3-205ENST00000557253 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
RIPK3-205ENST00000557253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
RIPK3-205ENST00000557253 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
RIPK3-205ENST00000557253 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
RIPK3-205ENST00000557253 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
RIPK3-205ENST00000557253 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
RIPK3-205ENST00000557253 ITGB4P16144 1822 aa13.57□□□□□ -0.24
RIPK3-205ENST00000557253 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
RIPK3-205ENST00000557253 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
RIPK3-205ENST00000557253 CYP27B1O15528 508 aa13.57□□□□□ -0.24
RIPK3-205ENST00000557253 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
RIPK3-205ENST00000557253 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
RIPK3-205ENST00000557253 LINC00116Q8NCU8 138 aa13.56□□□□□ -0.24
RIPK3-205ENST00000557253 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
RIPK3-205ENST00000557253 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
RIPK3-205ENST00000557253 APLP1P51693 650 aa13.55□□□□□ -0.24
RIPK3-205ENST00000557253 PIGBQ92521 554 aa13.55□□□□□ -0.24
RIPK3-205ENST00000557253 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
RIPK3-205ENST00000557253 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
RIPK3-205ENST00000557253 FYB1O15117 783 aa13.54□□□□□ -0.24
RIPK3-205ENST00000557253 DNAJC5GQ8N7S2 189 aa13.54□□□□□ -0.24
RIPK3-205ENST00000557253 TESK2Q96S53 571 aa13.54□□□□□ -0.24
RIPK3-205ENST00000557253 N4BP2Q86UW6 1770 aaPredicted RBP13.53□□□□□ -0.24
RIPK3-205ENST00000557253 SSFA2P28290 1259 aa13.53□□□□□ -0.24
RIPK3-205ENST00000557253 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 GNPATO15228 680 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 TOMM70O94826 608 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 SIK1P57059 783 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 ITPK1Q13572 414 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 BCS1LQ9Y276 419 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 INSRP06213 1382 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 NSD3Q9BZ95 1437 aa13.52□□□□□ -0.25
RIPK3-205ENST00000557253 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
RIPK3-205ENST00000557253 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.25
RIPK3-205ENST00000557253 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 MMP10P09238 476 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 HTRA3P83110 453 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 NMRK2Q9NPI5 230 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
RIPK3-205ENST00000557253 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
RIPK3-205ENST00000557253 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
RIPK3-205ENST00000557253 FLT4P35916 1363 aa13.5□□□□□ -0.25
RIPK3-205ENST00000557253 TMOD3Q9NYL9 352 aa13.49□□□□□ -0.25
RIPK3-205ENST00000557253 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
RIPK3-205ENST00000557253 WDR90Q96KV7 1748 aa13.49□□□□□ -0.25
RIPK3-205ENST00000557253 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
RIPK3-205ENST00000557253 TONSLQ96HA7 1378 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms