RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GOLGA6L3A6NEY3 463 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 CHL1O00533 1208 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 TRAK2O60296 914 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 IQSEC2Q5JU85 1478 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 MCM4P33991 863 aa18.89■□□□□ 0.61
TMEM55B-207ENST00000557041 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
TMEM55B-207ENST00000557041 PNPLA6Q8IY17 1366 aa18.88■□□□□ 0.61
TMEM55B-207ENST00000557041 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
TMEM55B-207ENST00000557041 GBP4Q96PP9 640 aa18.88■□□□□ 0.61
TMEM55B-207ENST00000557041 LRRFIP2Q9Y608 721 aaKnown RBP18.88■□□□□ 0.61
TMEM55B-207ENST00000557041 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
TMEM55B-207ENST00000557041 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
TMEM55B-207ENST00000557041 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
TMEM55B-207ENST00000557041 RPAP2Q8IXW5 612 aaPredicted RBP18.87■□□□□ 0.61
TMEM55B-207ENST00000557041 FAM135BQ49AJ0 1406 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 PLEKHG3A1L390 1219 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 ZNF853P0CG23 659 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 KCNJ4P48050 445 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 MSH6P52701 1360 aa18.86■□□□□ 0.61
TMEM55B-207ENST00000557041 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 SDSP20132 328 aa18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 HOXC9P31274 260 aa18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 TAF7Q15545 349 aaPredicted RBP18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 ORAI2Q96SN7 254 aa18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
TMEM55B-207ENST00000557041 NEK4P51957 841 aa18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 TAOK2Q9UL54 1235 aa18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 CCT4P50991 539 aaKnown RBP18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 TBX22Q9Y458 520 aa18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
TMEM55B-207ENST00000557041 CLTCQ00610 1675 aaKnown RBP18.83■□□□□ 0.61
TMEM55B-207ENST00000557041 CPS1P31327 1500 aa18.83■□□□□ 0.61
TMEM55B-207ENST00000557041 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
TMEM55B-207ENST00000557041 ST18O60284 1047 aa18.83■□□□□ 0.6
TMEM55B-207ENST00000557041 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
TMEM55B-207ENST00000557041 GNAI3P08754 354 aa18.83■□□□□ 0.6
TMEM55B-207ENST00000557041 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
TMEM55B-207ENST00000557041 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 GSPT1P15170 499 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 LRRCC1Q9C099 1032 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 MYL6BP14649 208 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 MCTP1Q6DN14 999 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 FLT4P35916 1363 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 ATP7BP35670 1465 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 REC8O95072 547 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 ANP32BQ92688 251 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
TMEM55B-207ENST00000557041 ABCC4O15439 1325 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 DTNBO60941 627 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
TMEM55B-207ENST00000557041 SETD1BQ9UPS6 1966 aaKnown RBP18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 KCNQ3O43525 872 aa18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 SSFA2P28290 1259 aa18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 L1TD1Q5T7N2 865 aaKnown RBP18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 SIL1Q9H173 461 aa18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 MCCP23508 829 aa18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 TNPO1Q92973 898 aaKnown RBP18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
TMEM55B-207ENST00000557041 PNMA6EA0A0J9YXQ4 647 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 NBPF6Q5VWK0 638 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 NBPF4Q96M43 638 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
TMEM55B-207ENST00000557041 PTPRCP08575 1304 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 DDX11L8A8MPP1 907 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 NEURL4Q96JN8 1562 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
TMEM55B-207ENST00000557041 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
TMEM55B-207ENST00000557041 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
TMEM55B-207ENST00000557041 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
TMEM55B-207ENST00000557041 CHRNA2Q15822 529 aa18.77■□□□□ 0.6
TMEM55B-207ENST00000557041 IFT172Q9UG01 1749 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms