RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 NPC1L1Q9UHC9 1359 aa29.47■■■□□ 2.31
KLC1-221ENST00000556986 ZCRB1Q8TBF4 217 aaKnown RBP29.46■■■□□ 2.31
KLC1-221ENST00000556986 EYA1Q99502 592 aa29.46■■■□□ 2.31
KLC1-221ENST00000556986 EIF4A2Q14240 407 aaKnown RBP29.45■■■□□ 2.31
KLC1-221ENST00000556986 PLSCR1O15162 318 aa29.44■■■□□ 2.3
KLC1-221ENST00000556986 RAPGEF4Q8WZA2 1011 aa29.44■■■□□ 2.3
KLC1-221ENST00000556986 DDX54Q8TDD1 881 aaKnown RBP29.43■■■□□ 2.3
KLC1-221ENST00000556986 NUP188Q5SRE5 1749 aa29.42■■■□□ 2.3
KLC1-221ENST00000556986 KCNQ2O43526 872 aa29.42■■■□□ 2.3
KLC1-221ENST00000556986 TATP17735 454 aaPredicted RBP29.42■■■□□ 2.3
KLC1-221ENST00000556986 PKD1L3Q7Z443 1732 aa29.42■■■□□ 2.3
KLC1-221ENST00000556986 CC2D1BQ5T0F9 858 aaKnown RBP29.4■■■□□ 2.3
KLC1-221ENST00000556986 ACSBG1Q96GR2 724 aa29.39■■■□□ 2.3
KLC1-221ENST00000556986 BTAF1O14981 1849 aa29.38■■■□□ 2.29
KLC1-221ENST00000556986 IGSF1Q8N6C5 1336 aa29.37■■■□□ 2.29
KLC1-221ENST00000556986 DOT1LQ8TEK3 1739 aa29.36■■■□□ 2.29
KLC1-221ENST00000556986 PROM2Q8N271 834 aa29.34■■■□□ 2.29
KLC1-221ENST00000556986 MTHFSP49914 203 aa29.33■■■□□ 2.29
KLC1-221ENST00000556986 PCDH11XQ9BZA7 1347 aa29.32■■■□□ 2.28
KLC1-221ENST00000556986 PCDH11YQ9BZA8 1340 aa29.32■■■□□ 2.28
KLC1-221ENST00000556986 PLEKHG2Q9H7P9 1386 aa29.31■■■□□ 2.28
KLC1-221ENST00000556986 CYP27B1O15528 508 aa29.31■■■□□ 2.28
KLC1-221ENST00000556986 IL13P35225 146 aa29.31■■■□□ 2.28
KLC1-221ENST00000556986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.31■■■□□ 2.28
KLC1-221ENST00000556986 PSDA5PKW4 1024 aaPredicted RBP29.27■■■□□ 2.28
KLC1-221ENST00000556986 PRIM1P49642 420 aaKnown RBP29.27■■■□□ 2.28
KLC1-221ENST00000556986 SPG7Q9UQ90 795 aa29.27■■■□□ 2.28
KLC1-221ENST00000556986 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
KLC1-221ENST00000556986 ITGB4P16144 1822 aa29.25■■■□□ 2.27
KLC1-221ENST00000556986 R3HDM1Q15032 1099 aaKnown RBP29.25■■■□□ 2.27
KLC1-221ENST00000556986 NKX1-1Q15270 411 aaPredicted RBP29.25■■■□□ 2.27
KLC1-221ENST00000556986 TXNRD1Q16881 649 aa29.25■■■□□ 2.27
KLC1-221ENST00000556986 KDRP35968 1356 aa29.24■■■□□ 2.27
KLC1-221ENST00000556986 CNGB1Q14028 1251 aaPredicted RBP29.23■■■□□ 2.27
KLC1-221ENST00000556986 NBPF14Q5TI25 921 aa29.23■■■□□ 2.27
KLC1-221ENST00000556986 AEBP1Q8IUX7 1158 aa29.22■■■□□ 2.27
KLC1-221ENST00000556986 LY75O60449 1722 aa29.22■■■□□ 2.27
KLC1-221ENST00000556986 COL3A1P02461 1466 aaPredicted RBP29.22■■■□□ 2.27
KLC1-221ENST00000556986 SRCAPQ6ZRS2 3230 aa29.22■■■□□ 2.27
KLC1-221ENST00000556986 SULT6B1Q6IMI4 303 aa29.2■■■□□ 2.26
KLC1-221ENST00000556986 SYTL4Q96C24 671 aaPredicted RBP29.2■■■□□ 2.26
KLC1-221ENST00000556986 PHKG2P15735 406 aa29.19■■■□□ 2.26
KLC1-221ENST00000556986 ZEB1P37275 1124 aaPredicted RBP29.18■■■□□ 2.26
KLC1-221ENST00000556986 IFNL2Q8IZJ0 200 aa29.18■■■□□ 2.26
KLC1-221ENST00000556986 ANO8Q9HCE9 1232 aaPredicted RBP29.18■■■□□ 2.26
KLC1-221ENST00000556986 PAPPAQ13219 1627 aa29.18■■■□□ 2.26
KLC1-221ENST00000556986 DIAPH1O60610 1272 aaKnown RBP29.17■■■□□ 2.26
KLC1-221ENST00000556986 PLEKHO1Q53GL0 409 aaPredicted RBP29.15■■■□□ 2.26
KLC1-221ENST00000556986 LRRC4BQ9NT99 713 aa29.15■■■□□ 2.26
KLC1-221ENST00000556986 LRP5O75197 1615 aa29.15■■■□□ 2.26
KLC1-221ENST00000556986 AMOTQ4VCS5 1084 aa29.14■■■□□ 2.26
KLC1-221ENST00000556986 PPP2R1AP30153 589 aa29.13■■■□□ 2.25
KLC1-221ENST00000556986 SLC27A3Q5K4L6 730 aa29.12■■■□□ 2.25
KLC1-221ENST00000556986 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
KLC1-221ENST00000556986 CASZ1Q86V15 1759 aa29.1■■■□□ 2.25
KLC1-221ENST00000556986 SLC15A2Q16348 729 aa29.09■■■□□ 2.25
KLC1-221ENST00000556986 PIGBQ92521 554 aa29.09■■■□□ 2.25
KLC1-221ENST00000556986 HMOX1P09601 288 aa29.08■■■□□ 2.25
KLC1-221ENST00000556986 ZNF530Q6P9A1 599 aaPredicted RBP29.08■■■□□ 2.25
KLC1-221ENST00000556986 STK32BQ9NY57 414 aa29.07■■■□□ 2.24
KLC1-221ENST00000556986 HSP90AB1P08238 724 aaKnown RBP29.06■■■□□ 2.24
KLC1-221ENST00000556986 DDX10Q13206 875 aaKnown RBP29.06■■■□□ 2.24
KLC1-221ENST00000556986 KDM6AO15550 1401 aaPredicted RBP29.05■■■□□ 2.24
KLC1-221ENST00000556986 DCAF5Q96JK2 942 aa29.05■■■□□ 2.24
KLC1-221ENST00000556986 VIRMAQ69YN4 1812 aaKnown RBP29.04■■■□□ 2.24
KLC1-221ENST00000556986 TAF1LQ8IZX4 1826 aa29.04■■■□□ 2.24
KLC1-221ENST00000556986 SCN11AQ9UI33 1791 aa29.04■■■□□ 2.24
KLC1-221ENST00000556986 QSER1Q2KHR3 1735 aa29.04■■■□□ 2.24
KLC1-221ENST00000556986 CFAP53Q96M91 514 aa29.04■■■□□ 2.24
KLC1-221ENST00000556986 ERVV-2B6SEH9 535 aa29.03■■■□□ 2.24
KLC1-221ENST00000556986 KCNQ4P56696 695 aa29.03■■■□□ 2.24
KLC1-221ENST00000556986 AKT1S1Q96B36 256 aa29.03■■■□□ 2.24
KLC1-221ENST00000556986 PALLDQ8WX93 1383 aa29.02■■■□□ 2.24
KLC1-221ENST00000556986 ZNF827Q17R98 1081 aa29.02■■■□□ 2.24
KLC1-221ENST00000556986 SMARCC1Q92922 1105 aaPredicted RBP29.02■■■□□ 2.24
KLC1-221ENST00000556986 TMOD3Q9NYL9 352 aa29.02■■■□□ 2.24
KLC1-221ENST00000556986 C1orf141Q5JVX7 400 aa29.01■■■□□ 2.23
KLC1-221ENST00000556986 PDGFDQ9GZP0 370 aaPredicted RBP29.01■■■□□ 2.23
KLC1-221ENST00000556986 CCNL1Q9UK58 526 aaPredicted RBP29.01■■■□□ 2.23
KLC1-221ENST00000556986 TUBGCP6Q96RT7 1819 aa29.01■■■□□ 2.23
KLC1-221ENST00000556986 U2SURPO15042 1029 aaKnown RBP29■■■□□ 2.23
KLC1-221ENST00000556986 C5P01031 1676 aa28.99■■■□□ 2.23
KLC1-221ENST00000556986 AKAP4Q5JQC9 854 aa28.99■■■□□ 2.23
KLC1-221ENST00000556986 MTHFSDQ2M296 383 aaKnown RBP28.98■■■□□ 2.23
KLC1-221ENST00000556986 ADAMTS7Q9UKP4 1686 aa28.97■■■□□ 2.23
KLC1-221ENST00000556986 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
KLC1-221ENST00000556986 ATG3Q9NT62 314 aa28.95■■■□□ 2.22
KLC1-221ENST00000556986 NUDCQ9Y266 331 aa28.95■■■□□ 2.22
KLC1-221ENST00000556986 RSPH6AQ9H0K4 717 aa28.94■■■□□ 2.22
KLC1-221ENST00000556986 RALBP1Q15311 655 aa28.93■■■□□ 2.22
KLC1-221ENST00000556986 ZNF831Q5JPB2 1677 aa28.93■■■□□ 2.22
KLC1-221ENST00000556986 CABP4P57796 275 aa28.92■■■□□ 2.22
KLC1-221ENST00000556986 SPON1Q9HCB6 807 aa28.92■■■□□ 2.22
KLC1-221ENST00000556986 LOC102724428A0A0B4J2F2 783 aa28.91■■■□□ 2.22
KLC1-221ENST00000556986 SIK1P57059 783 aa28.91■■■□□ 2.22
KLC1-221ENST00000556986 LGR6Q9HBX8 967 aa28.91■■■□□ 2.22
KLC1-221ENST00000556986 C4BP0C0L5 1744 aa28.9■■■□□ 2.22
KLC1-221ENST00000556986 HMGB2P26583 209 aaKnown RBP28.9■■■□□ 2.22
KLC1-221ENST00000556986 PNPLA7Q6ZV29 1317 aa28.9■■■□□ 2.22
KLC1-221ENST00000556986 RNMTO43148 476 aaKnown RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms