RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
CHGA-206ENST00000556876 INSRP06213 1382 aa23.81■■□□□ 1.4
CHGA-206ENST00000556876 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
CHGA-206ENST00000556876 AKT1S1Q96B36 256 aa23.81■■□□□ 1.4
CHGA-206ENST00000556876 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
CHGA-206ENST00000556876 SGIP1Q9BQI5 828 aa23.81■■□□□ 1.4
CHGA-206ENST00000556876 FHDC1Q9C0D6 1143 aaPredicted RBP23.81■■□□□ 1.4
CHGA-206ENST00000556876 FBLN1P23142 703 aa23.8■■□□□ 1.4
CHGA-206ENST00000556876 POLD1P28340 1107 aa23.8■■□□□ 1.4
CHGA-206ENST00000556876 FLT4P35916 1363 aa23.79■■□□□ 1.4
CHGA-206ENST00000556876 TFCP2L1Q9NZI6 479 aa23.79■■□□□ 1.4
CHGA-206ENST00000556876 MAP3K5Q99683 1374 aa23.78■■□□□ 1.4
CHGA-206ENST00000556876 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
CHGA-206ENST00000556876 PCDH11XQ9BZA7 1347 aa23.77■■□□□ 1.4
CHGA-206ENST00000556876 PCDH11YQ9BZA8 1340 aa23.77■■□□□ 1.4
CHGA-206ENST00000556876 HSP90AB2PQ58FF8 381 aa23.76■■□□□ 1.39
CHGA-206ENST00000556876 CCNL1Q9UK58 526 aaPredicted RBP23.75■■□□□ 1.39
CHGA-206ENST00000556876 BTAF1O14981 1849 aa23.73■■□□□ 1.39
CHGA-206ENST00000556876 KAT6BQ8WYB5 2073 aa23.73■■□□□ 1.39
CHGA-206ENST00000556876 MEGF6O75095 1541 aa23.73■■□□□ 1.39
CHGA-206ENST00000556876 FLAD1Q8NFF5 587 aa23.72■■□□□ 1.39
CHGA-206ENST00000556876 CARD14Q9BXL6 1004 aa23.72■■□□□ 1.39
CHGA-206ENST00000556876 NSD2O96028 1365 aa23.72■■□□□ 1.39
CHGA-206ENST00000556876 PAPPAQ13219 1627 aa23.72■■□□□ 1.39
CHGA-206ENST00000556876 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
CHGA-206ENST00000556876 PNPLA7Q6ZV29 1317 aa23.7■■□□□ 1.38
CHGA-206ENST00000556876 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
CHGA-206ENST00000556876 SPG7Q9UQ90 795 aa23.7■■□□□ 1.38
CHGA-206ENST00000556876 WASHC2AQ641Q2 1341 aa23.69■■□□□ 1.38
CHGA-206ENST00000556876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.69■■□□□ 1.38
CHGA-206ENST00000556876 NSD3Q9BZ95 1437 aa23.68■■□□□ 1.38
CHGA-206ENST00000556876 MYOM1P52179 1685 aa23.67■■□□□ 1.38
CHGA-206ENST00000556876 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
CHGA-206ENST00000556876 GPR162Q16538 588 aa23.65■■□□□ 1.38
CHGA-206ENST00000556876 EMILIN1Q9Y6C2 1016 aa23.65■■□□□ 1.38
CHGA-206ENST00000556876 MSH5O43196 834 aa23.64■■□□□ 1.37
CHGA-206ENST00000556876 NKX1-1Q15270 411 aaPredicted RBP23.64■■□□□ 1.37
CHGA-206ENST00000556876 MPRIPQ6WCQ1 1025 aa23.64■■□□□ 1.37
CHGA-206ENST00000556876 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
CHGA-206ENST00000556876 CYP27B1O15528 508 aa23.63■■□□□ 1.37
CHGA-206ENST00000556876 KCNQ4P56696 695 aa23.63■■□□□ 1.37
CHGA-206ENST00000556876 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHGA-206ENST00000556876 PLEKHG2Q9H7P9 1386 aa23.63■■□□□ 1.37
CHGA-206ENST00000556876 UTRNP46939 3433 aa23.62■■□□□ 1.37
CHGA-206ENST00000556876 PALLDQ8WX93 1383 aa23.61■■□□□ 1.37
CHGA-206ENST00000556876 COL23A1Q86Y22 540 aaPredicted RBP23.59■■□□□ 1.37
CHGA-206ENST00000556876 KLHL34Q8N239 644 aa23.59■■□□□ 1.37
CHGA-206ENST00000556876 ZNF784Q8NCA9 323 aaPredicted RBP23.59■■□□□ 1.37
CHGA-206ENST00000556876 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
CHGA-206ENST00000556876 QSER1Q2KHR3 1735 aa23.59■■□□□ 1.37
CHGA-206ENST00000556876 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
CHGA-206ENST00000556876 GRIN3BO60391 1043 aa23.58■■□□□ 1.37
CHGA-206ENST00000556876 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
CHGA-206ENST00000556876 EYA1Q99502 592 aa23.58■■□□□ 1.37
CHGA-206ENST00000556876 DOT1LQ8TEK3 1739 aa23.57■■□□□ 1.36
CHGA-206ENST00000556876 AK7Q96M32 723 aa23.57■■□□□ 1.36
CHGA-206ENST00000556876 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
CHGA-206ENST00000556876 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
CHGA-206ENST00000556876 TMOD3Q9NYL9 352 aa23.56■■□□□ 1.36
CHGA-206ENST00000556876 LY75O60449 1722 aa23.56■■□□□ 1.36
CHGA-206ENST00000556876 PIGBQ92521 554 aa23.55■■□□□ 1.36
CHGA-206ENST00000556876 HSP90AB1P08238 724 aaKnown RBP23.54■■□□□ 1.36
CHGA-206ENST00000556876 CD2APQ9Y5K6 639 aa23.54■■□□□ 1.36
CHGA-206ENST00000556876 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
CHGA-206ENST00000556876 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
CHGA-206ENST00000556876 LOC102724428A0A0B4J2F2 783 aa23.51■■□□□ 1.35
CHGA-206ENST00000556876 PHKG2P15735 406 aa23.51■■□□□ 1.35
CHGA-206ENST00000556876 SSFA2P28290 1259 aa23.51■■□□□ 1.35
CHGA-206ENST00000556876 SIK1P57059 783 aa23.51■■□□□ 1.35
CHGA-206ENST00000556876 EIF4A2Q14240 407 aaKnown RBP23.51■■□□□ 1.35
CHGA-206ENST00000556876 PELP1Q8IZL8 1130 aaKnown RBP23.51■■□□□ 1.35
CHGA-206ENST00000556876 PANK3Q9H999 370 aa23.51■■□□□ 1.35
CHGA-206ENST00000556876 ERVV-2B6SEH9 535 aa23.49■■□□□ 1.35
CHGA-206ENST00000556876 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
CHGA-206ENST00000556876 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
CHGA-206ENST00000556876 PLEKHO1Q53GL0 409 aaPredicted RBP23.49■■□□□ 1.35
CHGA-206ENST00000556876 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
CHGA-206ENST00000556876 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
CHGA-206ENST00000556876 COL24A1Q17RW2 1714 aa23.47■■□□□ 1.35
CHGA-206ENST00000556876 NLGN2Q8NFZ4 835 aa23.47■■□□□ 1.35
CHGA-206ENST00000556876 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
CHGA-206ENST00000556876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
CHGA-206ENST00000556876 MORC1Q86VD1 984 aa23.46■■□□□ 1.35
CHGA-206ENST00000556876 IGSF1Q8N6C5 1336 aa23.46■■□□□ 1.35
CHGA-206ENST00000556876 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
CHGA-206ENST00000556876 MSL1Q68DK7 614 aa23.45■■□□□ 1.34
CHGA-206ENST00000556876 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
CHGA-206ENST00000556876 PKD1L3Q7Z443 1732 aa23.44■■□□□ 1.34
CHGA-206ENST00000556876 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
CHGA-206ENST00000556876 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
CHGA-206ENST00000556876 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
CHGA-206ENST00000556876 PHF14O94880 888 aa23.41■■□□□ 1.34
CHGA-206ENST00000556876 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
CHGA-206ENST00000556876 CHD4Q14839 1912 aa23.41■■□□□ 1.34
CHGA-206ENST00000556876 GNPATO15228 680 aa23.4■■□□□ 1.34
CHGA-206ENST00000556876 C1QTNF8P60827 252 aa23.4■■□□□ 1.34
CHGA-206ENST00000556876 LINC00116Q8NCU8 138 aa23.4■■□□□ 1.34
CHGA-206ENST00000556876 C5P01031 1676 aa23.4■■□□□ 1.34
CHGA-206ENST00000556876 ADRA2BP18089 450 aa23.39■■□□□ 1.33
CHGA-206ENST00000556876 C1orf141Q5JVX7 400 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms