RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-214ENST00000556771 EIF4A2Q14240 407 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-214ENST00000556771 MARCH10Q8NA82 808 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-214ENST00000556771 MEGF6O75095 1541 aa14.3□□□□□ -0.12
MTHFD1-214ENST00000556771 BAG6P46379 1132 aa14.29□□□□□ -0.12
MTHFD1-214ENST00000556771 MTHFSP49914 203 aa14.29□□□□□ -0.12
MTHFD1-214ENST00000556771 EYA1Q99502 592 aa14.29□□□□□ -0.12
MTHFD1-214ENST00000556771 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
MTHFD1-214ENST00000556771 USHBP1Q8N6Y0 703 aa14.28□□□□□ -0.12
MTHFD1-214ENST00000556771 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-214ENST00000556771 TNS1Q9HBL0 1735 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-214ENST00000556771 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-214ENST00000556771 TRIM37O94972 964 aa14.27□□□□□ -0.13
MTHFD1-214ENST00000556771 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
MTHFD1-214ENST00000556771 PARD3Q8TEW0 1356 aa14.26□□□□□ -0.13
MTHFD1-214ENST00000556771 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
MTHFD1-214ENST00000556771 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
MTHFD1-214ENST00000556771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
MTHFD1-214ENST00000556771 EP400Q96L91 3159 aa14.26□□□□□ -0.13
MTHFD1-214ENST00000556771 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
MTHFD1-214ENST00000556771 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
MTHFD1-214ENST00000556771 SHANK3Q9BYB0 1731 aa14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 IL13P35225 146 aa14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 SPG7Q9UQ90 795 aa14.24□□□□□ -0.13
MTHFD1-214ENST00000556771 NHSQ6T4R5 1651 aa14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 KDRP35968 1356 aa14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 APBA3O96018 575 aa14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 RGPD3A6NKT7 1758 aaPredicted RBP14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 RGPD4Q7Z3J3 1758 aa14.23□□□□□ -0.13
MTHFD1-214ENST00000556771 DEFB132Q7Z7B7 95 aa14.22□□□□□ -0.13
MTHFD1-214ENST00000556771 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
MTHFD1-214ENST00000556771 PPP2R1AP30153 589 aa14.21□□□□□ -0.13
MTHFD1-214ENST00000556771 RALBP1Q15311 655 aa14.21□□□□□ -0.13
MTHFD1-214ENST00000556771 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
MTHFD1-214ENST00000556771 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
MTHFD1-214ENST00000556771 PLSCR1O15162 318 aa14.2□□□□□ -0.14
MTHFD1-214ENST00000556771 SULT6B1Q6IMI4 303 aa14.2□□□□□ -0.14
MTHFD1-214ENST00000556771 EN1Q05925 392 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-214ENST00000556771 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-214ENST00000556771 CAMKK2Q96RR4 588 aa14.19□□□□□ -0.14
MTHFD1-214ENST00000556771 NUDCQ9Y266 331 aa14.19□□□□□ -0.14
MTHFD1-214ENST00000556771 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
MTHFD1-214ENST00000556771 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
MTHFD1-214ENST00000556771 CYP27B1O15528 508 aa14.18□□□□□ -0.14
MTHFD1-214ENST00000556771 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
MTHFD1-214ENST00000556771 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
MTHFD1-214ENST00000556771 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
MTHFD1-214ENST00000556771 HSP90AB1P08238 724 aaKnown RBP14.17□□□□□ -0.14
MTHFD1-214ENST00000556771 AEBP1Q8IUX7 1158 aa14.17□□□□□ -0.14
MTHFD1-214ENST00000556771 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
MTHFD1-214ENST00000556771 RREB1Q92766 1687 aa14.17□□□□□ -0.14
MTHFD1-214ENST00000556771 BTAF1O14981 1849 aa14.16□□□□□ -0.14
MTHFD1-214ENST00000556771 KCNQ2O43526 872 aa14.16□□□□□ -0.14
MTHFD1-214ENST00000556771 PHKG2P15735 406 aa14.16□□□□□ -0.14
MTHFD1-214ENST00000556771 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
MTHFD1-214ENST00000556771 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
MTHFD1-214ENST00000556771 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
MTHFD1-214ENST00000556771 PTF1AQ7RTS3 328 aa14.15□□□□□ -0.14
MTHFD1-214ENST00000556771 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.15
MTHFD1-214ENST00000556771 HMOX1P09601 288 aa14.14□□□□□ -0.15
MTHFD1-214ENST00000556771 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
MTHFD1-214ENST00000556771 ZNF530Q6P9A1 599 aaPredicted RBP14.14□□□□□ -0.15
MTHFD1-214ENST00000556771 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
MTHFD1-214ENST00000556771 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
MTHFD1-214ENST00000556771 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
MTHFD1-214ENST00000556771 HMGB2P26583 209 aaKnown RBP14.12□□□□□ -0.15
MTHFD1-214ENST00000556771 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
MTHFD1-214ENST00000556771 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
MTHFD1-214ENST00000556771 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
MTHFD1-214ENST00000556771 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 TXNRD1Q16881 649 aa14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 SLC27A3Q5K4L6 730 aa14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 PRKRIP1Q9H875 184 aaPredicted RBP14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 ITGB4P16144 1822 aa14.11□□□□□ -0.15
MTHFD1-214ENST00000556771 FCHSD2O94868 740 aa14.1□□□□□ -0.15
MTHFD1-214ENST00000556771 AKAP4Q5JQC9 854 aa14.1□□□□□ -0.15
MTHFD1-214ENST00000556771 SMARCC1Q92922 1105 aaPredicted RBP14.1□□□□□ -0.15
MTHFD1-214ENST00000556771 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
MTHFD1-214ENST00000556771 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
MTHFD1-214ENST00000556771 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
MTHFD1-214ENST00000556771 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
MTHFD1-214ENST00000556771 LY75O60449 1722 aa14.08□□□□□ -0.16
MTHFD1-214ENST00000556771 PROM2Q8N271 834 aa14.08□□□□□ -0.16
MTHFD1-214ENST00000556771 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
MTHFD1-214ENST00000556771 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 NEFMP07197 916 aa14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 PIGBQ92521 554 aa14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
MTHFD1-214ENST00000556771 SCN11AQ9UI33 1791 aa14.06□□□□□ -0.16
MTHFD1-214ENST00000556771 CABP4P57796 275 aa14.06□□□□□ -0.16
MTHFD1-214ENST00000556771 ADAMTS7Q9UKP4 1686 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms