RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 NCAPD2Q15021 1401 aa14.2□□□□□ -0.14
SNX6-208ENST00000556712 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
SNX6-208ENST00000556712 CAMKK2Q96RR4 588 aa14.19□□□□□ -0.14
SNX6-208ENST00000556712 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
SNX6-208ENST00000556712 EIF4A2Q14240 407 aaKnown RBP14.18□□□□□ -0.14
SNX6-208ENST00000556712 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
SNX6-208ENST00000556712 DDX54Q8TDD1 881 aaKnown RBP14.18□□□□□ -0.14
SNX6-208ENST00000556712 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
SNX6-208ENST00000556712 KCNQ2O43526 872 aa14.17□□□□□ -0.14
SNX6-208ENST00000556712 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
SNX6-208ENST00000556712 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
SNX6-208ENST00000556712 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
SNX6-208ENST00000556712 TATP17735 454 aaPredicted RBP14.16□□□□□ -0.14
SNX6-208ENST00000556712 EYA1Q99502 592 aa14.16□□□□□ -0.14
SNX6-208ENST00000556712 PARD3Q8TEW0 1356 aa14.16□□□□□ -0.14
SNX6-208ENST00000556712 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
SNX6-208ENST00000556712 ITGB4P16144 1822 aa14.13□□□□□ -0.15
SNX6-208ENST00000556712 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
SNX6-208ENST00000556712 R3HDM1Q15032 1099 aaKnown RBP14.12□□□□□ -0.15
SNX6-208ENST00000556712 PCDH11XQ9BZA7 1347 aa14.12□□□□□ -0.15
SNX6-208ENST00000556712 PCDH11YQ9BZA8 1340 aa14.12□□□□□ -0.15
SNX6-208ENST00000556712 NPC1L1Q9UHC9 1359 aa14.11□□□□□ -0.15
SNX6-208ENST00000556712 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
SNX6-208ENST00000556712 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
SNX6-208ENST00000556712 COL3A1P02461 1466 aaPredicted RBP14.11□□□□□ -0.15
SNX6-208ENST00000556712 PLSCR1O15162 318 aa14.1□□□□□ -0.15
SNX6-208ENST00000556712 CYP27B1O15528 508 aa14.1□□□□□ -0.15
SNX6-208ENST00000556712 AEBP1Q8IUX7 1158 aa14.1□□□□□ -0.15
SNX6-208ENST00000556712 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
SNX6-208ENST00000556712 LY75O60449 1722 aa14.1□□□□□ -0.15
SNX6-208ENST00000556712 LRP5O75197 1615 aa14.09□□□□□ -0.15
SNX6-208ENST00000556712 MTHFSP49914 203 aa14.09□□□□□ -0.15
SNX6-208ENST00000556712 PROM2Q8N271 834 aa14.09□□□□□ -0.15
SNX6-208ENST00000556712 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
SNX6-208ENST00000556712 TXNRD1Q16881 649 aa14.08□□□□□ -0.16
SNX6-208ENST00000556712 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
SNX6-208ENST00000556712 IL13P35225 146 aa14.07□□□□□ -0.16
SNX6-208ENST00000556712 TUBGCP6Q96RT7 1819 aa14.06□□□□□ -0.16
SNX6-208ENST00000556712 SPG7Q9UQ90 795 aa14.06□□□□□ -0.16
SNX6-208ENST00000556712 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
SNX6-208ENST00000556712 VIRMAQ69YN4 1812 aaKnown RBP14.05□□□□□ -0.16
SNX6-208ENST00000556712 KDRP35968 1356 aa14.05□□□□□ -0.16
SNX6-208ENST00000556712 PHKG2P15735 406 aa14.04□□□□□ -0.16
SNX6-208ENST00000556712 NBPF14Q5TI25 921 aa14.04□□□□□ -0.16
SNX6-208ENST00000556712 C5P01031 1676 aa14.04□□□□□ -0.16
SNX6-208ENST00000556712 HMOX1P09601 288 aa14.03□□□□□ -0.16
SNX6-208ENST00000556712 KCNQ4P56696 695 aa14.03□□□□□ -0.16
SNX6-208ENST00000556712 LRRC4BQ9NT99 713 aa14.03□□□□□ -0.16
SNX6-208ENST00000556712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.162e-7■■■■□ 22.3
SNX6-208ENST00000556712 PLEKHG2Q9H7P9 1386 aa14.03□□□□□ -0.16
SNX6-208ENST00000556712 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
SNX6-208ENST00000556712 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
SNX6-208ENST00000556712 DIAPH1O60610 1272 aaKnown RBP14.02□□□□□ -0.17
SNX6-208ENST00000556712 ADRA2BP18089 450 aa14.02□□□□□ -0.17
SNX6-208ENST00000556712 ZNF530Q6P9A1 599 aaPredicted RBP14.02□□□□□ -0.17
SNX6-208ENST00000556712 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
SNX6-208ENST00000556712 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
SNX6-208ENST00000556712 PPP2R1AP30153 589 aa14.01□□□□□ -0.17
SNX6-208ENST00000556712 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
SNX6-208ENST00000556712 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
SNX6-208ENST00000556712 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
SNX6-208ENST00000556712 PDGFDQ9GZP0 370 aaPredicted RBP14.01□□□□□ -0.17
SNX6-208ENST00000556712 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
SNX6-208ENST00000556712 PALLDQ8WX93 1383 aa14□□□□□ -0.17
SNX6-208ENST00000556712 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
SNX6-208ENST00000556712 STK32BQ9NY57 414 aa14□□□□□ -0.17
SNX6-208ENST00000556712 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
SNX6-208ENST00000556712 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
SNX6-208ENST00000556712 SLC15A2Q16348 729 aa13.99□□□□□ -0.17
SNX6-208ENST00000556712 PIGBQ92521 554 aa13.99□□□□□ -0.17
SNX6-208ENST00000556712 TMOD3Q9NYL9 352 aa13.98□□□□□ -0.17
SNX6-208ENST00000556712 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
SNX6-208ENST00000556712 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
SNX6-208ENST00000556712 ZEB1P37275 1124 aaPredicted RBP13.97□□□□□ -0.17
SNX6-208ENST00000556712 AMOTQ4VCS5 1084 aa13.97□□□□□ -0.17
SNX6-208ENST00000556712 C1orf141Q5JVX7 400 aa13.97□□□□□ -0.17
SNX6-208ENST00000556712 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
SNX6-208ENST00000556712 C4BP0C0L5 1744 aa13.97□□□□□ -0.17
SNX6-208ENST00000556712 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.17
SNX6-208ENST00000556712 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
SNX6-208ENST00000556712 ZBTB7AO95365 584 aa13.95□□□□□ -0.18
SNX6-208ENST00000556712 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
SNX6-208ENST00000556712 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
SNX6-208ENST00000556712 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
SNX6-208ENST00000556712 MRC1P22897 1456 aa13.94□□□□□ -0.18
SNX6-208ENST00000556712 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
SNX6-208ENST00000556712 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
SNX6-208ENST00000556712 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
SNX6-208ENST00000556712 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
SNX6-208ENST00000556712 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
SNX6-208ENST00000556712 PNPLA7Q6ZV29 1317 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 CABP4P57796 275 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 RSPH6AQ9H0K4 717 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 TJP1Q07157 1748 aa13.92□□□□□ -0.18
SNX6-208ENST00000556712 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
SNX6-208ENST00000556712 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
SNX6-208ENST00000556712 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms