RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
GABRB3-211ENST00000556636 IL13P35225 146 aa14.59□□□□□ -0.07
GABRB3-211ENST00000556636 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
GABRB3-211ENST00000556636 PROM2Q8N271 834 aa14.58□□□□□ -0.08
GABRB3-211ENST00000556636 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
GABRB3-211ENST00000556636 IGSF1Q8N6C5 1336 aa14.58□□□□□ -0.08
GABRB3-211ENST00000556636 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
GABRB3-211ENST00000556636 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
GABRB3-211ENST00000556636 CYP27B1O15528 508 aa14.56□□□□□ -0.08
GABRB3-211ENST00000556636 RGPD1P0DJD0 1748 aa14.55□□□□□ -0.08
GABRB3-211ENST00000556636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.08
GABRB3-211ENST00000556636 PRIM1P49642 420 aaKnown RBP14.54□□□□□ -0.08
GABRB3-211ENST00000556636 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
GABRB3-211ENST00000556636 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
GABRB3-211ENST00000556636 SBF2Q86WG5 1849 aa14.54□□□□□ -0.08
GABRB3-211ENST00000556636 NKX1-1Q15270 411 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-211ENST00000556636 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.09
GABRB3-211ENST00000556636 SULT6B1Q6IMI4 303 aa14.52□□□□□ -0.09
GABRB3-211ENST00000556636 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
GABRB3-211ENST00000556636 PCDH11XQ9BZA7 1347 aa14.51□□□□□ -0.09
GABRB3-211ENST00000556636 PCDH11YQ9BZA8 1340 aa14.51□□□□□ -0.09
GABRB3-211ENST00000556636 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
GABRB3-211ENST00000556636 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
GABRB3-211ENST00000556636 TXNRD1Q16881 649 aa14.51□□□□□ -0.09
GABRB3-211ENST00000556636 SRCAPQ6ZRS2 3230 aa14.51□□□□□ -0.09
GABRB3-211ENST00000556636 KDRP35968 1356 aa14.5□□□□□ -0.09
GABRB3-211ENST00000556636 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
GABRB3-211ENST00000556636 PLEKHG2Q9H7P9 1386 aa14.49□□□□□ -0.09
GABRB3-211ENST00000556636 PHKG2P15735 406 aa14.49□□□□□ -0.09
GABRB3-211ENST00000556636 PSDA5PKW4 1024 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-211ENST00000556636 R3HDM1Q15032 1099 aaKnown RBP14.48□□□□□ -0.09
GABRB3-211ENST00000556636 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-211ENST00000556636 IFNL2Q8IZJ0 200 aa14.48□□□□□ -0.09
GABRB3-211ENST00000556636 SYTL4Q96C24 671 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-211ENST00000556636 COL3A1P02461 1466 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-211ENST00000556636 NHSQ6T4R5 1651 aa14.47□□□□□ -0.09
GABRB3-211ENST00000556636 HMOX1P09601 288 aa14.47□□□□□ -0.09
GABRB3-211ENST00000556636 AMOTQ4VCS5 1084 aa14.47□□□□□ -0.09
GABRB3-211ENST00000556636 LRRC4BQ9NT99 713 aa14.47□□□□□ -0.09
GABRB3-211ENST00000556636 ANO8Q9HCE9 1232 aaPredicted RBP14.46□□□□□ -0.09
GABRB3-211ENST00000556636 NBPF14Q5TI25 921 aa14.45□□□□□ -0.1
GABRB3-211ENST00000556636 PKD1L3Q7Z443 1732 aa14.45□□□□□ -0.1
GABRB3-211ENST00000556636 PIGBQ92521 554 aa14.45□□□□□ -0.1
GABRB3-211ENST00000556636 MPRIPQ6WCQ1 1025 aa14.44□□□□□ -0.1
GABRB3-211ENST00000556636 RREB1Q92766 1687 aa14.44□□□□□ -0.1
GABRB3-211ENST00000556636 KAT6BQ8WYB5 2073 aa14.44□□□□□ -0.1
GABRB3-211ENST00000556636 KCNQ4P56696 695 aa14.43□□□□□ -0.1
GABRB3-211ENST00000556636 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
GABRB3-211ENST00000556636 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
GABRB3-211ENST00000556636 MTHFSDQ2M296 383 aaKnown RBP14.42□□□□□ -0.1
GABRB3-211ENST00000556636 SLC27A3Q5K4L6 730 aa14.42□□□□□ -0.1
GABRB3-211ENST00000556636 DCAF5Q96JK2 942 aa14.42□□□□□ -0.1
GABRB3-211ENST00000556636 CFAP53Q96M91 514 aa14.42□□□□□ -0.1
GABRB3-211ENST00000556636 NUP188Q5SRE5 1749 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 BTAF1O14981 1849 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 ERVV-2B6SEH9 535 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 RALBP1Q15311 655 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-211ENST00000556636 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
GABRB3-211ENST00000556636 HSP90AB1P08238 724 aaKnown RBP14.4□□□□□ -0.1
GABRB3-211ENST00000556636 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-211ENST00000556636 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
GABRB3-211ENST00000556636 KDM6AO15550 1401 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-211ENST00000556636 DOT1LQ8TEK3 1739 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 ZNF827Q17R98 1081 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 AKAP4Q5JQC9 854 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 ATG3Q9NT62 314 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 TMOD3Q9NYL9 352 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
GABRB3-211ENST00000556636 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
GABRB3-211ENST00000556636 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-211ENST00000556636 C1orf141Q5JVX7 400 aa14.38□□□□□ -0.11
GABRB3-211ENST00000556636 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
GABRB3-211ENST00000556636 PALLDQ8WX93 1383 aa14.37□□□□□ -0.11
GABRB3-211ENST00000556636 FCHSD2O94868 740 aa14.37□□□□□ -0.11
GABRB3-211ENST00000556636 U2AF1L5P0DN76 240 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-211ENST00000556636 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.11
GABRB3-211ENST00000556636 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
GABRB3-211ENST00000556636 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-211ENST00000556636 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-211ENST00000556636 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
GABRB3-211ENST00000556636 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
GABRB3-211ENST00000556636 CABP4P57796 275 aa14.36□□□□□ -0.11
GABRB3-211ENST00000556636 IL17REQ8NFR9 667 aa14.35□□□□□ -0.11
GABRB3-211ENST00000556636 SLC4A9Q96Q91 983 aa14.35□□□□□ -0.11
GABRB3-211ENST00000556636 PRKRIP1Q9H875 184 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-211ENST00000556636 PAPPAQ13219 1627 aa14.34□□□□□ -0.11
GABRB3-211ENST00000556636 LOC102724428A0A0B4J2F2 783 aa14.34□□□□□ -0.11
GABRB3-211ENST00000556636 SIK1P57059 783 aa14.34□□□□□ -0.11
GABRB3-211ENST00000556636 ITGB4P16144 1822 aa14.34□□□□□ -0.11
GABRB3-211ENST00000556636 LY75O60449 1722 aa14.33□□□□□ -0.12
GABRB3-211ENST00000556636 ITPK1Q13572 414 aa14.33□□□□□ -0.12
GABRB3-211ENST00000556636 GAS2L2Q8NHY3 880 aa14.33□□□□□ -0.12
GABRB3-211ENST00000556636 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.12
GABRB3-211ENST00000556636 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms