RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 STK3Q13188 491 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 IDI1Q13907 227 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 MCM5P33992 734 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 CEBPZQ03701 1054 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 KINO60870 393 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 GOLGA6L1Q8N7Z2 621 aa17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF40-207ENST00000556399 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
ARHGEF40-207ENST00000556399 NUP62CLQ9H1M0 184 aa17.92■□□□□ 0.46
ARHGEF40-207ENST00000556399 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
ARHGEF40-207ENST00000556399 FANCAO15360 1455 aa17.92■□□□□ 0.46
ARHGEF40-207ENST00000556399 LRSAM1Q6UWE0 723 aa17.92■□□□□ 0.46
ARHGEF40-207ENST00000556399 NPHP1O15259 732 aa17.91■□□□□ 0.46
ARHGEF40-207ENST00000556399 PTPRCP08575 1304 aa17.91■□□□□ 0.46
ARHGEF40-207ENST00000556399 ANKRD1Q15327 319 aa17.91■□□□□ 0.46
ARHGEF40-207ENST00000556399 FAM69CQ0P6D2 419 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 NEUROD6Q96NK8 337 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 CCDC83Q8IWF9 413 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 MNS1Q8NEH6 495 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 PSME1Q06323 249 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 TSHZ3Q63HK5 1081 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 CCDC112Q8NEF3 446 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF40-207ENST00000556399 SPATA32Q96LK8 384 aa17.89■□□□□ 0.46
ARHGEF40-207ENST00000556399 MBD5Q9P267 1494 aa17.89■□□□□ 0.46
ARHGEF40-207ENST00000556399 TRIM29Q14134 588 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 ABTB2Q8N961 1025 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZMYND15Q9H091 742 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 TEX35Q5T0J7 233 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 TRMT2AQ8IZ69 625 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 ARGLU1Q9NWB6 273 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 DNAJC2Q99543 621 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 FERMT3Q86UX7 667 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
ARHGEF40-207ENST00000556399 VAMP4O75379 141 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 AACSQ86V21 672 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 PDCL2Q8N4E4 241 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 KIF1BPQ96EK5 621 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 DENND4BO75064 1496 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 CAMK4Q16566 473 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 SMC2O95347 1197 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 RASSF8Q8NHQ8 419 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 MEIS3Q99687 375 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 TRDNQ13061 729 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 SIL1Q9H173 461 aa17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
ARHGEF40-207ENST00000556399 GPS2Q13227 327 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 RAB11FIP3O75154 756 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 APPP05067 770 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 LARP6Q9BRS8 491 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 PRPF40BQ6NWY9 871 aaKnown RBP17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
ARHGEF40-207ENST00000556399 TULP1O00294 542 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 DYNC1I1O14576 645 aa17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 ADCY5O95622 1261 aa17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZNF396Q96N95 335 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
ARHGEF40-207ENST00000556399 GNAT3A8MTJ3 354 aa17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZBTB7BO15156 539 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 ZGPATQ8N5A5 531 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 DCTPP1Q9H773 170 aa17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 TPM1P09493 284 aa17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 RALYLQ86SE5 291 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 GLRX3O76003 335 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 PES1O00541 588 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 OFD1O75665 1012 aa17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 HOOK1Q9UJC3 728 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-207ENST00000556399 WASLO00401 505 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF40-207ENST00000556399 PDE1AP54750 535 aa17.83■□□□□ 0.45
ARHGEF40-207ENST00000556399 WASHC4Q2M389 1173 aa17.83■□□□□ 0.45
ARHGEF40-207ENST00000556399 DDX54Q8TDD1 881 aaKnown RBP17.83■□□□□ 0.45
ARHGEF40-207ENST00000556399 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF40-207ENST00000556399 CBX1P83916 185 aa17.83■□□□□ 0.44
ARHGEF40-207ENST00000556399 FLIIQ13045 1269 aa17.83■□□□□ 0.44
ARHGEF40-207ENST00000556399 STX6O43752 255 aa17.82■□□□□ 0.44
ARHGEF40-207ENST00000556399 CD109Q6YHK3 1445 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms