RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
SLIRP-206ENST00000556375 CAMKK2Q96RR4 588 aa15.73■□□□□ 0.11
SLIRP-206ENST00000556375 BCL11BQ9C0K0 894 aaPredicted RBP15.73■□□□□ 0.11
SLIRP-206ENST00000556375 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
SLIRP-206ENST00000556375 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
SLIRP-206ENST00000556375 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
SLIRP-206ENST00000556375 EIF4A2Q14240 407 aaKnown RBP15.71■□□□□ 0.11
SLIRP-206ENST00000556375 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
SLIRP-206ENST00000556375 EYA1Q99502 592 aa15.7■□□□□ 0.1
SLIRP-206ENST00000556375 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
SLIRP-206ENST00000556375 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
SLIRP-206ENST00000556375 PTF1AQ7RTS3 328 aa15.69■□□□□ 0.1
SLIRP-206ENST00000556375 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
SLIRP-206ENST00000556375 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
SLIRP-206ENST00000556375 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
SLIRP-206ENST00000556375 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
SLIRP-206ENST00000556375 PLSCR1O15162 318 aa15.68■□□□□ 0.1
SLIRP-206ENST00000556375 KCNQ2O43526 872 aa15.67■□□□□ 0.1
SLIRP-206ENST00000556375 ACSBG1Q96GR2 724 aa15.67■□□□□ 0.1
SLIRP-206ENST00000556375 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
SLIRP-206ENST00000556375 ITGB4P16144 1822 aa15.64■□□□□ 0.09
SLIRP-206ENST00000556375 LY75O60449 1722 aa15.64■□□□□ 0.09
SLIRP-206ENST00000556375 MTHFSP49914 203 aa15.64■□□□□ 0.09
SLIRP-206ENST00000556375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
SLIRP-206ENST00000556375 COL3A1P02461 1466 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-206ENST00000556375 KDRP35968 1356 aa15.63■□□□□ 0.09
SLIRP-206ENST00000556375 CYP27B1O15528 508 aa15.63■□□□□ 0.09
SLIRP-206ENST00000556375 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
SLIRP-206ENST00000556375 LRP5O75197 1615 aa15.63■□□□□ 0.09
SLIRP-206ENST00000556375 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
SLIRP-206ENST00000556375 SRCAPQ6ZRS2 3230 aa15.62■□□□□ 0.09
SLIRP-206ENST00000556375 IL13P35225 146 aa15.62■□□□□ 0.09
SLIRP-206ENST00000556375 PSDA5PKW4 1024 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-206ENST00000556375 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-206ENST00000556375 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
SLIRP-206ENST00000556375 CNGB1Q14028 1251 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-206ENST00000556375 R3HDM1Q15032 1099 aaKnown RBP15.6■□□□□ 0.09
SLIRP-206ENST00000556375 TXNRD1Q16881 649 aa15.6■□□□□ 0.09
SLIRP-206ENST00000556375 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
SLIRP-206ENST00000556375 PROM2Q8N271 834 aa15.6■□□□□ 0.09
SLIRP-206ENST00000556375 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-206ENST00000556375 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-206ENST00000556375 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
SLIRP-206ENST00000556375 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
SLIRP-206ENST00000556375 SULT6B1Q6IMI4 303 aa15.58■□□□□ 0.08
SLIRP-206ENST00000556375 ANO8Q9HCE9 1232 aaPredicted RBP15.58■□□□□ 0.08
SLIRP-206ENST00000556375 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
SLIRP-206ENST00000556375 PHKG2P15735 406 aa15.57■□□□□ 0.08
SLIRP-206ENST00000556375 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
SLIRP-206ENST00000556375 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
SLIRP-206ENST00000556375 QSER1Q2KHR3 1735 aa15.56■□□□□ 0.08
SLIRP-206ENST00000556375 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
SLIRP-206ENST00000556375 C5P01031 1676 aa15.55■□□□□ 0.08
SLIRP-206ENST00000556375 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-206ENST00000556375 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-206ENST00000556375 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 TUBGCP6Q96RT7 1819 aa15.54■□□□□ 0.08
SLIRP-206ENST00000556375 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-206ENST00000556375 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
SLIRP-206ENST00000556375 STK32BQ9NY57 414 aa15.53■□□□□ 0.08
SLIRP-206ENST00000556375 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
SLIRP-206ENST00000556375 HMOX1P09601 288 aa15.52■□□□□ 0.08
SLIRP-206ENST00000556375 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
SLIRP-206ENST00000556375 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
SLIRP-206ENST00000556375 ADAMTS7Q9UKP4 1686 aa15.51■□□□□ 0.07
SLIRP-206ENST00000556375 SLC15A2Q16348 729 aa15.51■□□□□ 0.07
SLIRP-206ENST00000556375 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
SLIRP-206ENST00000556375 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
SLIRP-206ENST00000556375 PIGBQ92521 554 aa15.5■□□□□ 0.07
SLIRP-206ENST00000556375 SMARCC1Q92922 1105 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-206ENST00000556375 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
SLIRP-206ENST00000556375 CCNL1Q9UK58 526 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-206ENST00000556375 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
SLIRP-206ENST00000556375 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
SLIRP-206ENST00000556375 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
SLIRP-206ENST00000556375 MRC1P22897 1456 aa15.48■□□□□ 0.07
SLIRP-206ENST00000556375 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SLIRP-206ENST00000556375 ZNF827Q17R98 1081 aa15.48■□□□□ 0.07
SLIRP-206ENST00000556375 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
SLIRP-206ENST00000556375 AKAP4Q5JQC9 854 aa15.47■□□□□ 0.07
SLIRP-206ENST00000556375 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
SLIRP-206ENST00000556375 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
SLIRP-206ENST00000556375 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
SLIRP-206ENST00000556375 KCNQ4P56696 695 aa15.46■□□□□ 0.07
SLIRP-206ENST00000556375 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SLIRP-206ENST00000556375 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-206ENST00000556375 COL5A3P25940 1745 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-206ENST00000556375 UBR3Q6ZT12 1888 aa15.44■□□□□ 0.06
SLIRP-206ENST00000556375 CABP4P57796 275 aa15.44■□□□□ 0.06
SLIRP-206ENST00000556375 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
SLIRP-206ENST00000556375 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-206ENST00000556375 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
SLIRP-206ENST00000556375 SPON1Q9HCB6 807 aa15.44■□□□□ 0.06
SLIRP-206ENST00000556375 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
SLIRP-206ENST00000556375 COL24A1Q17RW2 1714 aa15.43■□□□□ 0.06
SLIRP-206ENST00000556375 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms