RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 AMHR2Q16671 573 aa7.84□□□□□ -1.15
ATXN3-239ENST00000556315 SPIRE2Q8WWL2 714 aa7.84□□□□□ -1.15
ATXN3-239ENST00000556315 SLC24A3Q9HC58 644 aa7.84□□□□□ -1.15
ATXN3-239ENST00000556315 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-239ENST00000556315 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-239ENST00000556315 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
ATXN3-239ENST00000556315 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-239ENST00000556315 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-239ENST00000556315 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-239ENST00000556315 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-239ENST00000556315 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 PTCRAQ6ISU1 281 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-239ENST00000556315 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 HPS1Q92902 700 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 AK7Q96M32 723 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 ATP13A2Q9NQ11 1180 aa7.82□□□□□ -1.16
ATXN3-239ENST00000556315 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-239ENST00000556315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-239ENST00000556315 SIAH2O43255 324 aa7.81□□□□□ -1.16
ATXN3-239ENST00000556315 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-239ENST00000556315 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-239ENST00000556315 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-239ENST00000556315 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-239ENST00000556315 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
ATXN3-239ENST00000556315 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-239ENST00000556315 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-239ENST00000556315 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-239ENST00000556315 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
ATXN3-239ENST00000556315 MS4A1P11836 297 aa7.79□□□□□ -1.16
ATXN3-239ENST00000556315 NDUFV2P19404 249 aa7.79□□□□□ -1.16
ATXN3-239ENST00000556315 PTPRNQ16849 979 aa7.79□□□□□ -1.16
ATXN3-239ENST00000556315 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 CCNYL3P0C7X3 344 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 NFX1Q12986 1120 aaKnown RBP7.78□□□□□ -1.16
ATXN3-239ENST00000556315 TTLL12Q14166 644 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-239ENST00000556315 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 GIGYF2Q6Y7W6 1299 aaKnown RBP7.78□□□□□ -1.16
ATXN3-239ENST00000556315 TRIM47Q96LD4 638 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 EVA1BQ9NVM1 165 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-239ENST00000556315 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
ATXN3-239ENST00000556315 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 WFS1O76024 890 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
ATXN3-239ENST00000556315 GJA5P36382 358 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 SH3BP2P78314 561 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 DESI1Q6ICB0 168 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 SENP2Q9HC62 589 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-239ENST00000556315 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-239ENST00000556315 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-239ENST00000556315 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 ALDH1A1P00352 501 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 EHBP1Q8NDI1 1231 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-239ENST00000556315 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-239ENST00000556315 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 KCNH2Q12809 1159 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 MTMR2Q13614 643 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 BEGAINQ9BUH8 593 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 UNC93B1Q9H1C4 597 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-239ENST00000556315 TRIM66O15016 1216 aa7.74□□□□□ -1.17
ATXN3-239ENST00000556315 KIFC2Q96AC6 838 aa7.74□□□□□ -1.17
ATXN3-239ENST00000556315 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-239ENST00000556315 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 DIXDC1Q155Q3 683 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 RSBN1LQ6PCB5 846 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-239ENST00000556315 PARP9Q8IXQ6 854 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 TBC1D2Q9BYX2 928 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-239ENST00000556315 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-239ENST00000556315 WIPF1O43516 503 aa7.72□□□□□ -1.17
ATXN3-239ENST00000556315 BAP1Q92560 729 aa7.72□□□□□ -1.17
ATXN3-239ENST00000556315 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-239ENST00000556315 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
ATXN3-239ENST00000556315 SPTLC1O15269 473 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-239ENST00000556315 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-239ENST00000556315 PDE4DQ08499 809 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms