RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ARID3AQ99856 593 aa9.46□□□□□ -0.9
CHD8-209ENST00000555935 KIF3AQ9Y496 699 aa9.46□□□□□ -0.9
CHD8-209ENST00000555935 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
CHD8-209ENST00000555935 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
CHD8-209ENST00000555935 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
CHD8-209ENST00000555935 TMX3Q96JJ7 454 aa9.45□□□□□ -0.9
CHD8-209ENST00000555935 ZHX1Q9UKY1 873 aaPredicted RBP9.45□□□□□ -0.9
CHD8-209ENST00000555935 ABCA9Q8IUA7 1624 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
CHD8-209ENST00000555935 TSPYL6Q8N831 410 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 MCCP23508 829 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 DIAPH3Q9NSV4 1193 aa9.44□□□□□ -0.9
CHD8-209ENST00000555935 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
CHD8-209ENST00000555935 TPM3P06753 285 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 NEK4P51957 841 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
CHD8-209ENST00000555935 ANAPC15P60006 121 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
CHD8-209ENST00000555935 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 KNDC1Q76NI1 1749 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
CHD8-209ENST00000555935 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 NPATQ14207 1427 aa9.43□□□□□ -0.9
CHD8-209ENST00000555935 FRMPD1Q5SYB0 1578 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 CHAF1AQ13111 956 aaPredicted RBP9.42□□□□□ -0.9
CHD8-209ENST00000555935 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 CCDC183Q5T5S1 534 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 CEP85Q6P2H3 762 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
CHD8-209ENST00000555935 IL17RAQ96F46 866 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 WDR33Q9C0J8 1336 aaKnown RBP9.42□□□□□ -0.9
CHD8-209ENST00000555935 RTL1A6NKG5 1358 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
CHD8-209ENST00000555935 CD163L1Q9NR16 1453 aa9.42□□□□□ -0.9
CHD8-209ENST00000555935 ADCY5O95622 1261 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 CBX1P83916 185 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 OTUD7AQ8TE49 926 aaPredicted RBP9.41□□□□□ -0.9
CHD8-209ENST00000555935 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 USP25Q9UHP3 1055 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 ERCC6L2Q5T890 1561 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 SSH2Q76I76 1423 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
CHD8-209ENST00000555935 TAF3Q5VWG9 929 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 PDCL2Q8N4E4 241 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
CHD8-209ENST00000555935 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
CHD8-209ENST00000555935 RGS12O14924 1447 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 HMMRO75330 724 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
CHD8-209ENST00000555935 ELL2O00472 640 aaPredicted RBP9.4□□□□□ -0.9
CHD8-209ENST00000555935 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.9
CHD8-209ENST00000555935 KDM4AO75164 1064 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 MX1P20591 662 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 ATP2B3Q16720 1220 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 ANKRD7Q92527 254 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 FEZ1Q99689 392 aa9.4□□□□□ -0.9
CHD8-209ENST00000555935 THUMPD2Q9BTF0 503 aaKnown RBP9.4□□□□□ -0.9
CHD8-209ENST00000555935 TTC12Q9H892 705 aaPredicted RBP9.4□□□□□ -0.9
CHD8-209ENST00000555935 CHD1O14646 1710 aa9.4□□□□□ -0.91
CHD8-209ENST00000555935 PHACTR3Q96KR7 559 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 ZNF830Q96NB3 372 aaPredicted RBP9.39□□□□□ -0.91
CHD8-209ENST00000555935 NEXMIFQ5QGS0 1516 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 PIK3C2BO00750 1634 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 KIAA1524Q8TCG1 905 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 TSC1Q92574 1164 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 POLKQ9UBT6 870 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 ABCC3O15438 1527 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 PTPRCP08575 1304 aa9.39□□□□□ -0.91
CHD8-209ENST00000555935 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 PDE1AP54750 535 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 ARHGEF40Q8TER5 1519 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 A0A0U1RQG5 324 aaPredicted RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 UBE2HP62256 183 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 SYCP1Q15431 976 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 JARID2Q92833 1246 aaPredicted RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 KIDINS220Q9ULH0 1771 aa9.38□□□□□ -0.91
CHD8-209ENST00000555935 RPAP1Q9BWH6 1393 aaPredicted RBP9.38□□□□□ -0.91
CHD8-209ENST00000555935 PLEKHG5O94827 1062 aa9.37□□□□□ -0.91
CHD8-209ENST00000555935 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
CHD8-209ENST00000555935 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
CHD8-209ENST00000555935 PTPRMP28827 1452 aa9.37□□□□□ -0.91
CHD8-209ENST00000555935 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHD8-209ENST00000555935 MSH6P52701 1360 aa9.37□□□□□ -0.91
CHD8-209ENST00000555935 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
CHD8-209ENST00000555935 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
CHD8-209ENST00000555935 HMOX1P09601 288 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 ATP6V1DQ9Y5K8 247 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms