RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 HSPA1BP0DMV9 641 aaKnown RBP8.86□□□□□ -0.99
NEK9-207ENST00000555763 TCP11L2Q8N4U5 519 aa8.86□□□□□ -0.99
NEK9-207ENST00000555763 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
NEK9-207ENST00000555763 COL5A2P05997 1499 aaPredicted RBP8.85□□□□□ -0.99
NEK9-207ENST00000555763 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
NEK9-207ENST00000555763 THRAP3Q9Y2W1 955 aaKnown RBP8.85□□□□□ -0.99
NEK9-207ENST00000555763 KIAA1551Q9HCM1 1747 aa8.85□□□□□ -0.99
NEK9-207ENST00000555763 COL18A1P39060 1754 aa8.84□□□□□ -0.99
NEK9-207ENST00000555763 WAPLQ7Z5K2 1190 aa8.84□□□□□ -0.99
NEK9-207ENST00000555763 VPS8Q8N3P4 1428 aa8.84□□□□□ -0.99
NEK9-207ENST00000555763 ABCC11Q96J66 1382 aa8.84□□□□□ -0.99
NEK9-207ENST00000555763 VIRMAQ69YN4 1812 aaKnown RBP8.83□□□□□ -1
NEK9-207ENST00000555763 KIF13BQ9NQT8 1826 aa8.83□□□□□ -1
NEK9-207ENST00000555763 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
NEK9-207ENST00000555763 POLD1P28340 1107 aa8.83□□□□□ -1
NEK9-207ENST00000555763 CHRNA2Q15822 529 aa8.83□□□□□ -1
NEK9-207ENST00000555763 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
NEK9-207ENST00000555763 ARFGEF1Q9Y6D6 1849 aa8.82□□□□□ -1
NEK9-207ENST00000555763 USP54Q70EL1 1684 aa8.82□□□□□ -1
NEK9-207ENST00000555763 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
NEK9-207ENST00000555763 ZNF827Q17R98 1081 aa8.82□□□□□ -1
NEK9-207ENST00000555763 KANK4Q5T7N3 995 aaPredicted RBP8.82□□□□□ -1
NEK9-207ENST00000555763 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
NEK9-207ENST00000555763 SBF1O95248 1867 aa8.82□□□□□ -1
NEK9-207ENST00000555763 CRB1P82279 1406 aa8.81□□□□□ -1
NEK9-207ENST00000555763 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
NEK9-207ENST00000555763 TAF1LQ8IZX4 1826 aa8.81□□□□□ -1
NEK9-207ENST00000555763 C10orf71Q711Q0 1435 aa8.8□□□□□ -1
NEK9-207ENST00000555763 CLCN6P51797 869 aa8.8□□□□□ -1
NEK9-207ENST00000555763 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
NEK9-207ENST00000555763 BRD4O60885 1362 aaPredicted RBP8.8□□□□□ -1
NEK9-207ENST00000555763 YTHDC2Q9H6S0 1430 aaKnown RBP8.8□□□□□ -1
NEK9-207ENST00000555763 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
NEK9-207ENST00000555763 N4BP2Q86UW6 1770 aaPredicted RBP8.79□□□□□ -1
NEK9-207ENST00000555763 NUP155O75694 1391 aa8.79□□□□□ -1
NEK9-207ENST00000555763 CPDO75976 1380 aa8.79□□□□□ -1
NEK9-207ENST00000555763 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
NEK9-207ENST00000555763 ABCC6O95255 1503 aa8.79□□□□□ -1
NEK9-207ENST00000555763 PNPLA7Q6ZV29 1317 aa8.79□□□□□ -1
NEK9-207ENST00000555763 FSTL1Q12841 308 aa8.78□□□□□ -1
NEK9-207ENST00000555763 DDB1Q16531 1140 aa8.78□□□□□ -1
NEK9-207ENST00000555763 ZNF579Q8NAF0 562 aaKnown RBP8.78□□□□□ -1
NEK9-207ENST00000555763 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
NEK9-207ENST00000555763 C5P01031 1676 aa8.78□□□□□ -1
NEK9-207ENST00000555763 USP19O94966 1318 aa8.78□□□□□ -1
NEK9-207ENST00000555763 PXDNLA1KZ92 1463 aa8.77□□□□□ -1
NEK9-207ENST00000555763 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
NEK9-207ENST00000555763 GSE1Q14687 1217 aa8.77□□□□□ -1.01
NEK9-207ENST00000555763 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
NEK9-207ENST00000555763 RPGRIP1LQ68CZ1 1315 aa8.77□□□□□ -1.01
NEK9-207ENST00000555763 RGS19P49795 217 aa8.76□□□□□ -1.01
NEK9-207ENST00000555763 EVA1CP58658 441 aa8.76□□□□□ -1.01
NEK9-207ENST00000555763 ZC3H6P61129 1189 aaKnown RBP8.76□□□□□ -1.01
NEK9-207ENST00000555763 MLLT1Q03111 559 aaPredicted RBP8.76□□□□□ -1.01
NEK9-207ENST00000555763 NMRK2Q9NPI5 230 aa8.76□□□□□ -1.01
NEK9-207ENST00000555763 PIK3C2GO75747 1445 aa8.76□□□□□ -1.01
NEK9-207ENST00000555763 ANKRD30BQ9BXX2 1392 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 CCDC88AQ3V6T2 1871 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 DOT1LQ8TEK3 1739 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 TOGARAM1Q9Y4F4 1720 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 POTEJP0CG39 1038 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 STK26Q9P289 416 aa8.75□□□□□ -1.01
NEK9-207ENST00000555763 UBR3Q6ZT12 1888 aa8.74□□□□□ -1.01
NEK9-207ENST00000555763 STK25O00506 426 aa8.74□□□□□ -1.01
NEK9-207ENST00000555763 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
NEK9-207ENST00000555763 LRRC4BQ9NT99 713 aa8.74□□□□□ -1.01
NEK9-207ENST00000555763 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
NEK9-207ENST00000555763 SIRT1Q96EB6 747 aa8.73□□□□□ -1.01
NEK9-207ENST00000555763 CD2APQ9Y5K6 639 aa8.73□□□□□ -1.01
NEK9-207ENST00000555763 PRR36Q9H6K5 1346 aa8.73□□□□□ -1.01
NEK9-207ENST00000555763 CUL9Q8IWT3 2517 aa8.73□□□□□ -1.01
NEK9-207ENST00000555763 FAM163AQ96GL9 167 aaPredicted RBP8.72□□□□□ -1.01
NEK9-207ENST00000555763 ABHD8Q96I13 439 aa8.72□□□□□ -1.01
NEK9-207ENST00000555763 EIF3AQ14152 1382 aaKnown RBP8.72□□□□□ -1.01
NEK9-207ENST00000555763 TIAM2Q8IVF5 1701 aa8.71□□□□□ -1.01
NEK9-207ENST00000555763 KCPQ6ZWJ8 1503 aa8.71□□□□□ -1.01
NEK9-207ENST00000555763 ADGRF5Q8IZF2 1346 aa8.71□□□□□ -1.02
NEK9-207ENST00000555763 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
NEK9-207ENST00000555763 USP6P35125 1406 aa8.71□□□□□ -1.02
NEK9-207ENST00000555763 SLIT3O75094 1523 aa8.7□□□□□ -1.02
NEK9-207ENST00000555763 NUBP1P53384 320 aa8.7□□□□□ -1.02
NEK9-207ENST00000555763 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
NEK9-207ENST00000555763 IGSF1Q8N6C5 1336 aa8.7□□□□□ -1.02
NEK9-207ENST00000555763 FOXN1O15353 648 aa8.69□□□□□ -1.02
NEK9-207ENST00000555763 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
NEK9-207ENST00000555763 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
NEK9-207ENST00000555763 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
NEK9-207ENST00000555763 C16orf71Q8IYS4 520 aaPredicted RBP8.68□□□□□ -1.02
NEK9-207ENST00000555763 THSD7BQ9C0I4 1608 aa8.68□□□□□ -1.02
NEK9-207ENST00000555763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEK9-207ENST00000555763 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
NEK9-207ENST00000555763 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
NEK9-207ENST00000555763 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
NEK9-207ENST00000555763 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
NEK9-207ENST00000555763 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
NEK9-207ENST00000555763 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
NEK9-207ENST00000555763 TFCP2L1Q9NZI6 479 aa8.66□□□□□ -1.02
NEK9-207ENST00000555763 DICER1Q9UPY3 1922 aaKnown RBP8.66□□□□□ -1.02
NEK9-207ENST00000555763 ADGRB1O14514 1584 aa8.65□□□□□ -1.02
NEK9-207ENST00000555763 SPATA31E1Q6ZUB1 1445 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms