RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 RGPD5Q99666 1765 aa8.81□□□□□ -1
PRKCH-217ENST00000555604 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
PRKCH-217ENST00000555604 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
PRKCH-217ENST00000555604 PARP4Q9UKK3 1724 aaKnown RBP8.8□□□□□ -1
PRKCH-217ENST00000555604 HSP90AB1P08238 724 aaKnown RBP8.8□□□□□ -1
PRKCH-217ENST00000555604 HMGB2P26583 209 aaKnown RBP8.8□□□□□ -1
PRKCH-217ENST00000555604 U2SURPO15042 1029 aaKnown RBP8.79□□□□□ -1
PRKCH-217ENST00000555604 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
PRKCH-217ENST00000555604 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
PRKCH-217ENST00000555604 ILDR2Q71H61 639 aa8.79□□□□□ -1
PRKCH-217ENST00000555604 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
PRKCH-217ENST00000555604 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
PRKCH-217ENST00000555604 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
PRKCH-217ENST00000555604 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
PRKCH-217ENST00000555604 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
PRKCH-217ENST00000555604 GAS2L2Q8NHY3 880 aa8.78□□□□□ -1
PRKCH-217ENST00000555604 MEGF6O75095 1541 aa8.78□□□□□ -1
PRKCH-217ENST00000555604 RGPD1P0DJD0 1748 aa8.77□□□□□ -1
PRKCH-217ENST00000555604 SOCS7O14512 581 aa8.77□□□□□ -1.01
PRKCH-217ENST00000555604 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
PRKCH-217ENST00000555604 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
PRKCH-217ENST00000555604 DIEXFQ68CQ4 756 aaKnown RBP8.77□□□□□ -1.01
PRKCH-217ENST00000555604 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
PRKCH-217ENST00000555604 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
PRKCH-217ENST00000555604 LRRC37A3O60309 1634 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 HMOX1P09601 288 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 PHKG2P15735 406 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 AKAP4Q5JQC9 854 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
PRKCH-217ENST00000555604 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-217ENST00000555604 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
PRKCH-217ENST00000555604 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
PRKCH-217ENST00000555604 HTATSF1O43719 755 aaKnown RBP8.75□□□□□ -1.01
PRKCH-217ENST00000555604 PRKAR2BP31323 418 aa8.75□□□□□ -1.01
PRKCH-217ENST00000555604 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
PRKCH-217ENST00000555604 CYP27B1O15528 508 aa8.74□□□□□ -1.01
PRKCH-217ENST00000555604 NCBP3Q53F19 620 aaKnown RBP8.74□□□□□ -1.01
PRKCH-217ENST00000555604 ZNF530Q6P9A1 599 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-217ENST00000555604 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
PRKCH-217ENST00000555604 PLEKHF1Q96S99 279 aa8.74□□□□□ -1.01
PRKCH-217ENST00000555604 MRS2Q9HD23 443 aa8.74□□□□□ -1.01
PRKCH-217ENST00000555604 PKD1L3Q7Z443 1732 aa8.74□□□□□ -1.01
PRKCH-217ENST00000555604 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
PRKCH-217ENST00000555604 PLSCR1O15162 318 aa8.73□□□□□ -1.01
PRKCH-217ENST00000555604 LMOD3Q0VAK6 560 aa8.73□□□□□ -1.01
PRKCH-217ENST00000555604 MTHFSDQ2M296 383 aaKnown RBP8.73□□□□□ -1.01
PRKCH-217ENST00000555604 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
PRKCH-217ENST00000555604 PNISRQ8TF01 805 aaKnown RBP8.73□□□□□ -1.01
PRKCH-217ENST00000555604 RUNDC1Q96C34 613 aa8.73□□□□□ -1.01
PRKCH-217ENST00000555604 RGPD2P0DJD1 1756 aa8.72□□□□□ -1.01
PRKCH-217ENST00000555604 BAG6P46379 1132 aa8.72□□□□□ -1.01
PRKCH-217ENST00000555604 RTF1Q92541 710 aaKnown RBP8.72□□□□□ -1.01
PRKCH-217ENST00000555604 ADAMTS8Q9UP79 889 aa8.72□□□□□ -1.01
PRKCH-217ENST00000555604 BRWD3Q6RI45 1802 aa8.71□□□□□ -1.01
PRKCH-217ENST00000555604 TRIM37O94972 964 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 APBA3O96018 575 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 NFE2L2Q16236 605 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 SMARCC1Q92922 1105 aaPredicted RBP8.71□□□□□ -1.02
PRKCH-217ENST00000555604 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 TMOD3Q9NYL9 352 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
PRKCH-217ENST00000555604 PRIM1P49642 420 aaKnown RBP8.7□□□□□ -1.02
PRKCH-217ENST00000555604 CABP4P57796 275 aa8.7□□□□□ -1.02
PRKCH-217ENST00000555604 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
PRKCH-217ENST00000555604 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
PRKCH-217ENST00000555604 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
PRKCH-217ENST00000555604 SLC27A3Q5K4L6 730 aa8.69□□□□□ -1.02
PRKCH-217ENST00000555604 SYTL4Q96C24 671 aaPredicted RBP8.69□□□□□ -1.02
PRKCH-217ENST00000555604 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
PRKCH-217ENST00000555604 BABAM1Q9NWV8 329 aa8.69□□□□□ -1.02
PRKCH-217ENST00000555604 CEMIPQ8WUJ3 1361 aa8.69□□□□□ -1.02
PRKCH-217ENST00000555604 KCNQ2O43526 872 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
PRKCH-217ENST00000555604 TEFQ10587 303 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 ACSBG1Q96GR2 724 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 NHSQ6T4R5 1651 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
PRKCH-217ENST00000555604 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-217ENST00000555604 RIPK4P57078 832 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 PIGBQ92521 554 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 EP400Q96L91 3159 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 CAMKK2Q96RR4 588 aa8.67□□□□□ -1.02
PRKCH-217ENST00000555604 MRC1P22897 1456 aa8.66□□□□□ -1.02
PRKCH-217ENST00000555604 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
PRKCH-217ENST00000555604 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
PRKCH-217ENST00000555604 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-217ENST00000555604 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
PRKCH-217ENST00000555604 ADAMTS7Q9UKP4 1686 aa8.65□□□□□ -1.02
PRKCH-217ENST00000555604 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-217ENST00000555604 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
PRKCH-217ENST00000555604 CCDC146Q8IYE0 955 aa8.65□□□□□ -1.02
PRKCH-217ENST00000555604 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
PRKCH-217ENST00000555604 MIER1Q8N108 512 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms