RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 EXOC5O00471 708 aa23.25■■□□□ 1.31
PSEN1-212ENST00000555254 NEFMP07197 916 aa23.25■■□□□ 1.31
PSEN1-212ENST00000555254 IL2RBP14784 551 aa23.25■■□□□ 1.31
PSEN1-212ENST00000555254 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
PSEN1-212ENST00000555254 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
PSEN1-212ENST00000555254 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
PSEN1-212ENST00000555254 MAP2P11137 1827 aaKnown RBP23.23■■□□□ 1.31
PSEN1-212ENST00000555254 COL3A1P02461 1466 aaPredicted RBP23.23■■□□□ 1.31
PSEN1-212ENST00000555254 IL13P35225 146 aa23.22■■□□□ 1.31
PSEN1-212ENST00000555254 SF3B2Q13435 895 aaKnown RBP23.22■■□□□ 1.31
PSEN1-212ENST00000555254 PEAK1Q9H792 1746 aa23.22■■□□□ 1.31
PSEN1-212ENST00000555254 FCHSD2O94868 740 aa23.21■■□□□ 1.31
PSEN1-212ENST00000555254 SALL2Q9Y467 1007 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-212ENST00000555254 DISP2A7MBM2 1401 aa23.19■■□□□ 1.3
PSEN1-212ENST00000555254 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
PSEN1-212ENST00000555254 APAF1O14727 1248 aa23.19■■□□□ 1.3
PSEN1-212ENST00000555254 MARCH10Q8NA82 808 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-212ENST00000555254 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
PSEN1-212ENST00000555254 TRIM37O94972 964 aa23.18■■□□□ 1.3
PSEN1-212ENST00000555254 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
PSEN1-212ENST00000555254 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-212ENST00000555254 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
PSEN1-212ENST00000555254 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
PSEN1-212ENST00000555254 EYA1Q99502 592 aa23.15■■□□□ 1.3
PSEN1-212ENST00000555254 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
PSEN1-212ENST00000555254 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
PSEN1-212ENST00000555254 YY1P25490 414 aa23.13■■□□□ 1.29
PSEN1-212ENST00000555254 LRRC37A3O60309 1634 aa23.12■■□□□ 1.29
PSEN1-212ENST00000555254 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
PSEN1-212ENST00000555254 HMOX1P09601 288 aa23.12■■□□□ 1.29
PSEN1-212ENST00000555254 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
PSEN1-212ENST00000555254 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
PSEN1-212ENST00000555254 TNS2Q63HR2 1409 aa23.11■■□□□ 1.29
PSEN1-212ENST00000555254 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
PSEN1-212ENST00000555254 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
PSEN1-212ENST00000555254 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
PSEN1-212ENST00000555254 APBA3O96018 575 aa23.1■■□□□ 1.29
PSEN1-212ENST00000555254 BAG6P46379 1132 aa23.1■■□□□ 1.29
PSEN1-212ENST00000555254 PLEKHF1Q96S99 279 aa23.1■■□□□ 1.29
PSEN1-212ENST00000555254 MEGF6O75095 1541 aa23.09■■□□□ 1.29
PSEN1-212ENST00000555254 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
PSEN1-212ENST00000555254 IFFO2Q5TF58 517 aa23.09■■□□□ 1.29
PSEN1-212ENST00000555254 SULT6B1Q6IMI4 303 aa23.09■■□□□ 1.29
PSEN1-212ENST00000555254 ACSBG1Q96GR2 724 aa23.08■■□□□ 1.29
PSEN1-212ENST00000555254 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
PSEN1-212ENST00000555254 EN1Q05925 392 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-212ENST00000555254 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
PSEN1-212ENST00000555254 WNK3Q9BYP7 1800 aa23.07■■□□□ 1.28
PSEN1-212ENST00000555254 RRP7AQ9Y3A4 280 aaKnown RBP23.06■■□□□ 1.28
PSEN1-212ENST00000555254 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
PSEN1-212ENST00000555254 CCDC27Q2M243 656 aa23.05■■□□□ 1.28
PSEN1-212ENST00000555254 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
PSEN1-212ENST00000555254 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-212ENST00000555254 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
PSEN1-212ENST00000555254 KCNQ2O43526 872 aa23.03■■□□□ 1.28
PSEN1-212ENST00000555254 RIPK4P57078 832 aa23.03■■□□□ 1.28
PSEN1-212ENST00000555254 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
PSEN1-212ENST00000555254 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
PSEN1-212ENST00000555254 NFE2L2Q16236 605 aa23.02■■□□□ 1.28
PSEN1-212ENST00000555254 WDR63Q8IWG1 891 aa23.02■■□□□ 1.28
PSEN1-212ENST00000555254 WWC1Q8IX03 1113 aa23.02■■□□□ 1.28
PSEN1-212ENST00000555254 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
PSEN1-212ENST00000555254 EZH2Q15910 746 aaKnown RBP23■■□□□ 1.27
PSEN1-212ENST00000555254 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
PSEN1-212ENST00000555254 ZNF521Q96K83 1311 aa23■■□□□ 1.27
PSEN1-212ENST00000555254 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
PSEN1-212ENST00000555254 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
PSEN1-212ENST00000555254 BCL9O00512 1426 aa22.99■■□□□ 1.27
PSEN1-212ENST00000555254 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
PSEN1-212ENST00000555254 E9PSI1 815 aa22.99■■□□□ 1.27
PSEN1-212ENST00000555254 PHACTR3Q96KR7 559 aa22.99■■□□□ 1.27
PSEN1-212ENST00000555254 CYP27B1O15528 508 aa22.98■■□□□ 1.27
PSEN1-212ENST00000555254 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
PSEN1-212ENST00000555254 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
PSEN1-212ENST00000555254 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-212ENST00000555254 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
PSEN1-212ENST00000555254 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
PSEN1-212ENST00000555254 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
PSEN1-212ENST00000555254 SLFN5Q08AF3 891 aa22.96■■□□□ 1.27
PSEN1-212ENST00000555254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.276e-6■□□□□ 8.9
PSEN1-212ENST00000555254 KDRP35968 1356 aa22.95■■□□□ 1.26
PSEN1-212ENST00000555254 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
PSEN1-212ENST00000555254 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
PSEN1-212ENST00000555254 MYH16Q9H6N6 1097 aa22.93■■□□□ 1.26
PSEN1-212ENST00000555254 NEFLP07196 543 aa22.92■■□□□ 1.26
PSEN1-212ENST00000555254 AMOTQ4VCS5 1084 aa22.92■■□□□ 1.26
PSEN1-212ENST00000555254 ZNF530Q6P9A1 599 aaPredicted RBP22.92■■□□□ 1.26
PSEN1-212ENST00000555254 TRIM35Q9UPQ4 493 aa22.92■■□□□ 1.26
PSEN1-212ENST00000555254 TNS1Q9HBL0 1735 aaKnown RBP22.91■■□□□ 1.26
PSEN1-212ENST00000555254 IL16Q14005 1332 aa22.91■■□□□ 1.26
PSEN1-212ENST00000555254 PLSCR1O15162 318 aa22.91■■□□□ 1.26
PSEN1-212ENST00000555254 PHKG2P15735 406 aa22.91■■□□□ 1.26
PSEN1-212ENST00000555254 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
PSEN1-212ENST00000555254 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
PSEN1-212ENST00000555254 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
PSEN1-212ENST00000555254 SUPT16HQ9Y5B9 1047 aaKnown RBP22.89■■□□□ 1.25
PSEN1-212ENST00000555254 NKX1-1Q15270 411 aaPredicted RBP22.88■■□□□ 1.25
PSEN1-212ENST00000555254 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
PSEN1-212ENST00000555254 DUSP27Q5VZP5 1158 aa22.88■■□□□ 1.25
PSEN1-212ENST00000555254 TRMT2AQ8IZ69 625 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms