RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-209	ENST00000554947	RALBP1	Q15311	655 aa		32.68	■■■□□ 2.82
SDR39U1-209	ENST00000554947	PKD1L3	Q7Z443	1732 aa		32.68	■■■□□ 2.82
SDR39U1-209	ENST00000554947	ZCRB1	Q8TBF4	217 aa	Known RBP	32.67	■■■□□ 2.82
SDR39U1-209	ENST00000554947	DIAPH1	O60610	1272 aa	Known RBP	32.66	■■■□□ 2.82
SDR39U1-209	ENST00000554947	CFAP53	Q96M91	514 aa		32.65	■■■□□ 2.82
SDR39U1-209	ENST00000554947	TNS1	Q9HBL0	1735 aa	Known RBP	32.64	■■■□□ 2.82
SDR39U1-209	ENST00000554947	KDR	P35968	1356 aa		32.63	■■■□□ 2.81
SDR39U1-209	ENST00000554947	SF3B2	Q13435	895 aa	Known RBP	32.63	■■■□□ 2.81
SDR39U1-209	ENST00000554947	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
SDR39U1-209	ENST00000554947	KAT6B	Q8WYB5	2073 aa		32.61	■■■□□ 2.81
SDR39U1-209	ENST00000554947	PCDH11X	Q9BZA7	1347 aa		32.59	■■■□□ 2.81
SDR39U1-209	ENST00000554947	PCDH11Y	Q9BZA8	1340 aa		32.59	■■■□□ 2.81
SDR39U1-209	ENST00000554947	TRIM37	O94972	964 aa		32.58	■■■□□ 2.81
SDR39U1-209	ENST00000554947	DDX54	Q8TDD1	881 aa	Known RBP	32.58	■■■□□ 2.81
SDR39U1-209	ENST00000554947	SPG7	Q9UQ90	795 aa		32.58	■■■□□ 2.81
SDR39U1-209	ENST00000554947	SULT6B1	Q6IMI4	303 aa		32.56	■■■□□ 2.8
SDR39U1-209	ENST00000554947	NHS	Q6T4R5	1651 aa		32.56	■■■□□ 2.8
SDR39U1-209	ENST00000554947	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.54	■■■□□ 2.8
SDR39U1-209	ENST00000554947	BAG6	P46379	1132 aa		32.53	■■■□□ 2.8
SDR39U1-209	ENST00000554947	AEBP1	Q8IUX7	1158 aa		32.53	■■■□□ 2.8
SDR39U1-209	ENST00000554947	NUDC	Q9Y266	331 aa		32.52	■■■□□ 2.8
SDR39U1-209	ENST00000554947	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.51	■■■□□ 2.8
SDR39U1-209	ENST00000554947	AMOT	Q4VCS5	1084 aa		32.51	■■■□□ 2.79
SDR39U1-209	ENST00000554947	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.51	■■■□□ 2.79
SDR39U1-209	ENST00000554947	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.5	■■■□□ 2.79
SDR39U1-209	ENST00000554947	CYP27B1	O15528	508 aa		32.49	■■■□□ 2.79
SDR39U1-209	ENST00000554947	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.49	■■■□□ 2.79
SDR39U1-209	ENST00000554947	RGPD4	Q7Z3J3	1758 aa		32.49	■■■□□ 2.79
SDR39U1-209	ENST00000554947	DOT1L	Q8TEK3	1739 aa		32.48	■■■□□ 2.79
SDR39U1-209	ENST00000554947	U2SURP	O15042	1029 aa	Known RBP	32.47	■■■□□ 2.79
SDR39U1-209	ENST00000554947	NKX1-1	Q15270	411 aa	Predicted RBP	32.47	■■■□□ 2.79
SDR39U1-209	ENST00000554947	APBA3	O96018	575 aa		32.46	■■■□□ 2.79
SDR39U1-209	ENST00000554947	IFNL2	Q8IZJ0	200 aa		32.46	■■■□□ 2.79
SDR39U1-209	ENST00000554947	HMOX1	P09601	288 aa		32.45	■■■□□ 2.79
SDR39U1-209	ENST00000554947	DEFB132	Q7Z7B7	95 aa		32.45	■■■□□ 2.79
SDR39U1-209	ENST00000554947	BTAF1	O14981	1849 aa		32.44	■■■□□ 2.78
SDR39U1-209	ENST00000554947	PHKG2	P15735	406 aa		32.43	■■■□□ 2.78
SDR39U1-209	ENST00000554947	ACSBG1	Q96GR2	724 aa		32.43	■■■□□ 2.78
SDR39U1-209	ENST00000554947	PLSCR1	O15162	318 aa		32.42	■■■□□ 2.78
SDR39U1-209	ENST00000554947	KCNQ2	O43526	872 aa		32.41	■■■□□ 2.78
SDR39U1-209	ENST00000554947	ITGB4	P16144	1822 aa		32.4	■■■□□ 2.78
SDR39U1-209	ENST00000554947	HSP90AB1	P08238	724 aa	Known RBP	32.4	■■■□□ 2.78
SDR39U1-209	ENST00000554947	CAMKK2	Q96RR4	588 aa		32.4	■■■□□ 2.78
SDR39U1-209	ENST00000554947	EN1	Q05925	392 aa	Predicted RBP	32.39	■■■□□ 2.78
SDR39U1-209	ENST00000554947	PTF1A	Q7RTS3	328 aa		32.39	■■■□□ 2.78
SDR39U1-209	ENST00000554947	TOGARAM1	Q9Y4F4	1720 aa		32.39	■■■□□ 2.78
SDR39U1-209	ENST00000554947	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.38	■■■□□ 2.77
SDR39U1-209	ENST00000554947	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.38	■■■□□ 2.77	2e-8	■■■■□ 22.5
SDR39U1-209	ENST00000554947	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.38	■■■□□ 2.77
SDR39U1-209	ENST00000554947	RREB1	Q92766	1687 aa		32.37	■■■□□ 2.77
SDR39U1-209	ENST00000554947	FCHSD2	O94868	740 aa		32.37	■■■□□ 2.77
SDR39U1-209	ENST00000554947	PRIM1	P49642	420 aa	Known RBP	32.37	■■■□□ 2.77
SDR39U1-209	ENST00000554947	RSPH6A	Q9H0K4	717 aa		32.36	■■■□□ 2.77
SDR39U1-209	ENST00000554947	C1orf141	Q5JVX7	400 aa		32.35	■■■□□ 2.77
SDR39U1-209	ENST00000554947	EZH2	Q15910	746 aa	Known RBP	32.33	■■■□□ 2.77
SDR39U1-209	ENST00000554947	DCAF5	Q96JK2	942 aa		32.33	■■■□□ 2.77
SDR39U1-209	ENST00000554947	AKAP4	Q5JQC9	854 aa		32.32	■■■□□ 2.76
SDR39U1-209	ENST00000554947	SYTL4	Q96C24	671 aa	Predicted RBP	32.32	■■■□□ 2.76
SDR39U1-209	ENST00000554947	VIRMA	Q69YN4	1812 aa	Known RBP	32.32	■■■□□ 2.76
SDR39U1-209	ENST00000554947	SCN11A	Q9UI33	1791 aa		32.32	■■■□□ 2.76
SDR39U1-209	ENST00000554947	ANP32C	O43423	234 aa		32.3	■■■□□ 2.76
SDR39U1-209	ENST00000554947	PRKAR2B	P31323	418 aa		32.3	■■■□□ 2.76
SDR39U1-209	ENST00000554947	ERVV-2	B6SEH9	535 aa		32.29	■■■□□ 2.76
SDR39U1-209	ENST00000554947	MTHFSD	Q2M296	383 aa	Known RBP	32.29	■■■□□ 2.76
SDR39U1-209	ENST00000554947	GAS2L2	Q8NHY3	880 aa		32.29	■■■□□ 2.76
SDR39U1-209	ENST00000554947	NUP188	Q5SRE5	1749 aa		32.29	■■■□□ 2.76
SDR39U1-209	ENST00000554947	KDM6A	O15550	1401 aa	Predicted RBP	32.27	■■■□□ 2.76
SDR39U1-209	ENST00000554947	LY75	O60449	1722 aa		32.27	■■■□□ 2.76
SDR39U1-209	ENST00000554947	PNN	Q9H307	717 aa	Known RBP	32.27	■■■□□ 2.76
SDR39U1-209	ENST00000554947	ADAMTS7	Q9UKP4	1686 aa		32.26	■■■□□ 2.75
SDR39U1-209	ENST00000554947	MPRIP	Q6WCQ1	1025 aa		32.24	■■■□□ 2.75
SDR39U1-209	ENST00000554947	PHACTR3	Q96KR7	559 aa		32.23	■■■□□ 2.75
SDR39U1-209	ENST00000554947	TMOD3	Q9NYL9	352 aa		32.23	■■■□□ 2.75
SDR39U1-209	ENST00000554947	PROM2	Q8N271	834 aa		32.22	■■■□□ 2.75
SDR39U1-209	ENST00000554947	PIGB	Q92521	554 aa		32.22	■■■□□ 2.75
SDR39U1-209	ENST00000554947	NEFM	P07197	916 aa		32.21	■■■□□ 2.75
SDR39U1-209	ENST00000554947	TXNRD1	Q16881	649 aa		32.21	■■■□□ 2.75
SDR39U1-209	ENST00000554947	SMARCC1	Q92922	1105 aa	Predicted RBP	32.2	■■■□□ 2.75
SDR39U1-209	ENST00000554947	PLEKHF1	Q96S99	279 aa		32.2	■■■□□ 2.75
SDR39U1-209	ENST00000554947	MAP3K5	Q99683	1374 aa		32.19	■■■□□ 2.74
SDR39U1-209	ENST00000554947	SLC27A3	Q5K4L6	730 aa		32.19	■■■□□ 2.74
SDR39U1-209	ENST00000554947	GNAT3	A8MTJ3	354 aa		32.18	■■■□□ 2.74
SDR39U1-209	ENST00000554947	MRC1	P22897	1456 aa		32.17	■■■□□ 2.74
SDR39U1-209	ENST00000554947	RNMT	O43148	476 aa	Known RBP	32.17	■■■□□ 2.74
SDR39U1-209	ENST00000554947	CABP4	P57796	275 aa		32.17	■■■□□ 2.74
SDR39U1-209	ENST00000554947	WDR43	Q15061	677 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
SDR39U1-209	ENST00000554947	DLG5	Q8TDM6	1919 aa		32.15	■■■□□ 2.74
SDR39U1-209	ENST00000554947	HMGB2	P26583	209 aa	Known RBP	32.14	■■■□□ 2.74
SDR39U1-209	ENST00000554947	NBPF14	Q5TI25	921 aa		32.14	■■■□□ 2.74
SDR39U1-209	ENST00000554947	PALLD	Q8WX93	1383 aa		32.14	■■■□□ 2.74
SDR39U1-209	ENST00000554947	LGR6	Q9HBX8	967 aa		32.13	■■■□□ 2.73
SDR39U1-209	ENST00000554947	PAPPA	Q13219	1627 aa		32.12	■■■□□ 2.73
SDR39U1-209	ENST00000554947	SLC52A2	Q9HAB3	445 aa		32.12	■■■□□ 2.73
SDR39U1-209	ENST00000554947	MAPK8IP3	Q9UPT6	1336 aa		32.11	■■■□□ 2.73
SDR39U1-209	ENST00000554947	HTATSF1	O43719	755 aa	Known RBP	32.11	■■■□□ 2.73
SDR39U1-209	ENST00000554947	NFATC2IP	Q8NCF5	419 aa		32.1	■■■□□ 2.73
SDR39U1-209	ENST00000554947	SIPA1L3	O60292	1781 aa	Predicted RBP	32.09	■■■□□ 2.73
SDR39U1-209	ENST00000554947	CEMIP	Q8WUJ3	1361 aa		32.09	■■■□□ 2.73
SDR39U1-209	ENST00000554947	ATG3	Q9NT62	314 aa		32.09	■■■□□ 2.73
SDR39U1-209	ENST00000554947	LRRC4B	Q9NT99	713 aa		32.09	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms