RNA–Protein interactions for RNA: ENST00000554359.1

ITGA7-209, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-209ENST00000554359 ZCRB1Q8TBF4 217 aaKnown RBP25.24■■□□□ 1.63
ITGA7-209ENST00000554359 LRRC4BQ9NT99 713 aa25.24■■□□□ 1.63
ITGA7-209ENST00000554359 NSD2O96028 1365 aa25.23■■□□□ 1.63
ITGA7-209ENST00000554359 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
ITGA7-209ENST00000554359 SMG6Q86US8 1419 aaKnown RBP25.22■■□□□ 1.63
ITGA7-209ENST00000554359 KIF24Q5T7B8 1368 aa25.22■■□□□ 1.63
ITGA7-209ENST00000554359 PPP1R1BQ9UD71 204 aaPredicted RBP25.22■■□□□ 1.63
ITGA7-209ENST00000554359 PRIM1P49642 420 aaKnown RBP25.21■■□□□ 1.63
ITGA7-209ENST00000554359 ZNF827Q17R98 1081 aa25.21■■□□□ 1.63
ITGA7-209ENST00000554359 PTGER2P43116 358 aa25.2■■□□□ 1.62
ITGA7-209ENST00000554359 ANKRD26Q9UPS8 1709 aa25.2■■□□□ 1.62
ITGA7-209ENST00000554359 ATF5Q9Y2D1 282 aaPredicted RBP25.19■■□□□ 1.62
ITGA7-209ENST00000554359 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
ITGA7-209ENST00000554359 CCER1Q8TC90 406 aaPredicted RBP25.18■■□□□ 1.62
ITGA7-209ENST00000554359 SYTL4Q96C24 671 aaPredicted RBP25.18■■□□□ 1.62
ITGA7-209ENST00000554359 POLR3GLQ9BT43 218 aa25.17■■□□□ 1.62
ITGA7-209ENST00000554359 CGNL1Q0VF96 1302 aa25.16■■□□□ 1.62
ITGA7-209ENST00000554359 RAPGEF4Q8WZA2 1011 aa25.16■■□□□ 1.62
ITGA7-209ENST00000554359 KCNQ4P56696 695 aa25.15■■□□□ 1.62
ITGA7-209ENST00000554359 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
ITGA7-209ENST00000554359 EIF4G2P78344 907 aaKnown RBP eCLIP25.14■■□□□ 1.62
ITGA7-209ENST00000554359 AKT1S1Q96B36 256 aa25.14■■□□□ 1.62
ITGA7-209ENST00000554359 SGIP1Q9BQI5 828 aa25.14■■□□□ 1.62
ITGA7-209ENST00000554359 LY75O60449 1722 aa25.14■■□□□ 1.61
ITGA7-209ENST00000554359 TATP17735 454 aaPredicted RBP25.13■■□□□ 1.61
ITGA7-209ENST00000554359 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
ITGA7-209ENST00000554359 MTFR1LQ9H019 292 aa25.13■■□□□ 1.61
ITGA7-209ENST00000554359 UTRNP46939 3433 aa25.13■■□□□ 1.61
ITGA7-209ENST00000554359 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
ITGA7-209ENST00000554359 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
ITGA7-209ENST00000554359 MAP2P11137 1827 aaKnown RBP25.11■■□□□ 1.61
ITGA7-209ENST00000554359 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
ITGA7-209ENST00000554359 TUBGCP6Q96RT7 1819 aa25.1■■□□□ 1.61
ITGA7-209ENST00000554359 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
ITGA7-209ENST00000554359 PCDH11XQ9BZA7 1347 aa25.1■■□□□ 1.61
ITGA7-209ENST00000554359 PCDH11YQ9BZA8 1340 aa25.1■■□□□ 1.61
ITGA7-209ENST00000554359 CYP27B1O15528 508 aa25.09■■□□□ 1.61
ITGA7-209ENST00000554359 QSER1Q2KHR3 1735 aa25.09■■□□□ 1.61
ITGA7-209ENST00000554359 TOGARAM1Q9Y4F4 1720 aa25.09■■□□□ 1.61
ITGA7-209ENST00000554359 PNPLA7Q6ZV29 1317 aa25.07■■□□□ 1.6
ITGA7-209ENST00000554359 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
ITGA7-209ENST00000554359 EYA1Q99502 592 aa25.06■■□□□ 1.6
ITGA7-209ENST00000554359 PANK3Q9H999 370 aa25.06■■□□□ 1.6
ITGA7-209ENST00000554359 FHDC1Q9C0D6 1143 aaPredicted RBP25.04■■□□□ 1.6
ITGA7-209ENST00000554359 CCNL1Q9UK58 526 aaPredicted RBP25.04■■□□□ 1.6
ITGA7-209ENST00000554359 EIF4A2Q14240 407 aaKnown RBP25.02■■□□□ 1.6
ITGA7-209ENST00000554359 SYT17Q9BSW7 474 aa25.02■■□□□ 1.6
ITGA7-209ENST00000554359 TFCP2L1Q9NZI6 479 aa25.01■■□□□ 1.59
ITGA7-209ENST00000554359 COL24A1Q17RW2 1714 aa25■■□□□ 1.59
ITGA7-209ENST00000554359 ITGB4P16144 1822 aa25■■□□□ 1.59
ITGA7-209ENST00000554359 ARXQ96QS3 562 aa25■■□□□ 1.59
ITGA7-209ENST00000554359 MPRIPQ6WCQ1 1025 aa24.99■■□□□ 1.59
ITGA7-209ENST00000554359 PALLDQ8WX93 1383 aa24.98■■□□□ 1.59
ITGA7-209ENST00000554359 NKX1-1Q15270 411 aaPredicted RBP24.98■■□□□ 1.59
ITGA7-209ENST00000554359 C5P01031 1676 aa24.97■■□□□ 1.59
ITGA7-209ENST00000554359 SLC16A10Q8TF71 515 aa24.97■■□□□ 1.59
ITGA7-209ENST00000554359 YY1P25490 414 aa24.96■■□□□ 1.59
ITGA7-209ENST00000554359 SPG7Q9UQ90 795 aa24.96■■□□□ 1.59
ITGA7-209ENST00000554359 GOLGB1Q14789 3259 aaKnown RBP24.96■■□□□ 1.59
ITGA7-209ENST00000554359 MAP3K5Q99683 1374 aa24.95■■□□□ 1.59
ITGA7-209ENST00000554359 PIGBQ92521 554 aa24.95■■□□□ 1.58
ITGA7-209ENST00000554359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.95■■□□□ 1.58
ITGA7-209ENST00000554359 IGSF1Q8N6C5 1336 aa24.94■■□□□ 1.58
ITGA7-209ENST00000554359 TAF1LQ8IZX4 1826 aa24.94■■□□□ 1.58
ITGA7-209ENST00000554359 COL23A1Q86Y22 540 aaPredicted RBP24.94■■□□□ 1.58
ITGA7-209ENST00000554359 DCAF8L1A6NGE4 600 aa24.93■■□□□ 1.58
ITGA7-209ENST00000554359 PHKG2P15735 406 aa24.92■■□□□ 1.58
ITGA7-209ENST00000554359 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
ITGA7-209ENST00000554359 MORC1Q86VD1 984 aa24.9■■□□□ 1.58
ITGA7-209ENST00000554359 AMIGO3Q86WK7 504 aa24.89■■□□□ 1.58
ITGA7-209ENST00000554359 C4BP0C0L5 1744 aa24.89■■□□□ 1.57
ITGA7-209ENST00000554359 POLD1P28340 1107 aa24.88■■□□□ 1.57
ITGA7-209ENST00000554359 IFNL2Q8IZJ0 200 aa24.88■■□□□ 1.57
ITGA7-209ENST00000554359 SMARCC1Q92922 1105 aaPredicted RBP24.88■■□□□ 1.57
ITGA7-209ENST00000554359 AMER1Q5JTC6 1135 aaPredicted RBP24.87■■□□□ 1.57
ITGA7-209ENST00000554359 PLEKHG2Q9H7P9 1386 aa24.87■■□□□ 1.57
ITGA7-209ENST00000554359 MSH5O43196 834 aa24.86■■□□□ 1.57
ITGA7-209ENST00000554359 AEBP1Q8IUX7 1158 aa24.86■■□□□ 1.57
ITGA7-209ENST00000554359 ASAP1Q9ULH1 1129 aa24.86■■□□□ 1.57
ITGA7-209ENST00000554359 KNSTRNQ9Y448 316 aa24.86■■□□□ 1.57
ITGA7-209ENST00000554359 MSL1Q68DK7 614 aa24.85■■□□□ 1.57
ITGA7-209ENST00000554359 SMIM5Q71RC9 77 aa24.85■■□□□ 1.57
ITGA7-209ENST00000554359 TMOD3Q9NYL9 352 aa24.85■■□□□ 1.57
ITGA7-209ENST00000554359 KLHL34Q8N239 644 aa24.84■■□□□ 1.57
ITGA7-209ENST00000554359 LOC102724428A0A0B4J2F2 783 aa24.83■■□□□ 1.57
ITGA7-209ENST00000554359 SIK1P57059 783 aa24.83■■□□□ 1.57
ITGA7-209ENST00000554359 LINC00116Q8NCU8 138 aa24.83■■□□□ 1.57
ITGA7-209ENST00000554359 NLGN2Q8NFZ4 835 aa24.83■■□□□ 1.57
ITGA7-209ENST00000554359 UBR3Q6ZT12 1888 aa24.83■■□□□ 1.56
ITGA7-209ENST00000554359 ITPK1Q13572 414 aa24.82■■□□□ 1.56
ITGA7-209ENST00000554359 ATG3Q9NT62 314 aa24.82■■□□□ 1.56
ITGA7-209ENST00000554359 KDM6AO15550 1401 aaPredicted RBP24.81■■□□□ 1.56
ITGA7-209ENST00000554359 IL13P35225 146 aa24.8■■□□□ 1.56
ITGA7-209ENST00000554359 AK7Q96M32 723 aa24.8■■□□□ 1.56
ITGA7-209ENST00000554359 KDRP35968 1356 aa24.79■■□□□ 1.56
ITGA7-209ENST00000554359 PER1O15534 1290 aaPredicted RBP24.78■■□□□ 1.56
ITGA7-209ENST00000554359 PHF14O94880 888 aa24.78■■□□□ 1.56
ITGA7-209ENST00000554359 PLEKHO1Q53GL0 409 aaPredicted RBP24.78■■□□□ 1.56
ITGA7-209ENST00000554359 ZNF530Q6P9A1 599 aaPredicted RBP24.78■■□□□ 1.56
ITGA7-209ENST00000554359 FLAD1Q8NFF5 587 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms