RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
ATXN3-226ENST00000554350 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
ATXN3-226ENST00000554350 SUPT6HQ7KZ85 1726 aaKnown RBP9.72□□□□□ -0.85
ATXN3-226ENST00000554350 F12P00748 615 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-226ENST00000554350 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
ATXN3-226ENST00000554350 CPS1P31327 1500 aa9.71□□□□□ -0.86
ATXN3-226ENST00000554350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATXN3-226ENST00000554350 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.86
ATXN3-226ENST00000554350 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
ATXN3-226ENST00000554350 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
ATXN3-226ENST00000554350 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
ATXN3-226ENST00000554350 SLC24A3Q9HC58 644 aa9.7□□□□□ -0.86
ATXN3-226ENST00000554350 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
ATXN3-226ENST00000554350 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
ATXN3-226ENST00000554350 PLA2R1Q13018 1463 aa9.68□□□□□ -0.86
ATXN3-226ENST00000554350 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-226ENST00000554350 WFS1O76024 890 aa9.68□□□□□ -0.86
ATXN3-226ENST00000554350 QPCTQ16769 361 aa9.68□□□□□ -0.86
ATXN3-226ENST00000554350 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
ATXN3-226ENST00000554350 SHANK2Q9UPX8 1470 aa9.67□□□□□ -0.86
ATXN3-226ENST00000554350 CNTLNQ9NXG0 1405 aa9.67□□□□□ -0.86
ATXN3-226ENST00000554350 BMP1P13497 986 aa9.67□□□□□ -0.86
ATXN3-226ENST00000554350 MPNDQ8N594 471 aa9.67□□□□□ -0.86
ATXN3-226ENST00000554350 TCOF1Q13428 1488 aaKnown RBP9.66□□□□□ -0.86
ATXN3-226ENST00000554350 NPATQ14207 1427 aa9.66□□□□□ -0.86
ATXN3-226ENST00000554350 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
ATXN3-226ENST00000554350 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
ATXN3-226ENST00000554350 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
ATXN3-226ENST00000554350 AFAP1Q8N556 730 aa9.66□□□□□ -0.86
ATXN3-226ENST00000554350 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
ATXN3-226ENST00000554350 NUP153P49790 1475 aaKnown RBP9.66□□□□□ -0.86
ATXN3-226ENST00000554350 CAPN5O15484 640 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-226ENST00000554350 LILRB3O75022 631 aa9.65□□□□□ -0.86
ATXN3-226ENST00000554350 CTHP32929 405 aa9.65□□□□□ -0.86
ATXN3-226ENST00000554350 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
ATXN3-226ENST00000554350 FOXJ1Q92949 421 aa9.65□□□□□ -0.86
ATXN3-226ENST00000554350 ZNF518AQ6AHZ1 1483 aa9.65□□□□□ -0.87
ATXN3-226ENST00000554350 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 DIP2CQ9Y2E4 1556 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 CEP170BQ9Y4F5 1589 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-226ENST00000554350 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-226ENST00000554350 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 PLCH2O75038 1416 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
ATXN3-226ENST00000554350 ZMYM3Q14202 1370 aa9.63□□□□□ -0.87
ATXN3-226ENST00000554350 AGLP35573 1532 aa9.63□□□□□ -0.87
ATXN3-226ENST00000554350 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
ATXN3-226ENST00000554350 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
ATXN3-226ENST00000554350 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-226ENST00000554350 ZNF142P52746 1687 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-226ENST00000554350 NNTQ13423 1086 aa9.62□□□□□ -0.87
ATXN3-226ENST00000554350 RTL5Q5HYW3 569 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-226ENST00000554350 ABCA6Q8N139 1617 aa9.61□□□□□ -0.87
ATXN3-226ENST00000554350 CDK15Q96Q40 435 aa9.61□□□□□ -0.87
ATXN3-226ENST00000554350 REREQ9P2R6 1566 aa9.6□□□□□ -0.87
ATXN3-226ENST00000554350 WIPF1O43516 503 aa9.6□□□□□ -0.87
ATXN3-226ENST00000554350 TIMP2P16035 220 aa9.6□□□□□ -0.87
ATXN3-226ENST00000554350 MROH2AA6NES4 1674 aa9.59□□□□□ -0.87
ATXN3-226ENST00000554350 PLEKHG3A1L390 1219 aa9.59□□□□□ -0.87
ATXN3-226ENST00000554350 ADH1CP00326 375 aa9.59□□□□□ -0.87
ATXN3-226ENST00000554350 KDM5CP41229 1560 aa9.58□□□□□ -0.88
ATXN3-226ENST00000554350 RNF17Q9BXT8 1623 aaKnown RBP9.58□□□□□ -0.88
ATXN3-226ENST00000554350 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
ATXN3-226ENST00000554350 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-226ENST00000554350 FAM174AQ8TBP5 190 aa9.58□□□□□ -0.88
ATXN3-226ENST00000554350 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-226ENST00000554350 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
ATXN3-226ENST00000554350 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
ATXN3-226ENST00000554350 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-226ENST00000554350 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-226ENST00000554350 NR3C2P08235 984 aa9.57□□□□□ -0.88
ATXN3-226ENST00000554350 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-226ENST00000554350 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
ATXN3-226ENST00000554350 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-226ENST00000554350 ZFP42Q96MM3 310 aa9.57□□□□□ -0.88
ATXN3-226ENST00000554350 CLTCQ00610 1675 aaKnown RBP9.56□□□□□ -0.88
ATXN3-226ENST00000554350 VWDEQ8N2E2 1590 aa9.56□□□□□ -0.88
ATXN3-226ENST00000554350 GRM5P41594 1212 aa9.56□□□□□ -0.88
ATXN3-226ENST00000554350 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
ATXN3-226ENST00000554350 TSC1Q92574 1164 aa9.56□□□□□ -0.88
ATXN3-226ENST00000554350 C1QTNF2Q9BXJ5 285 aa9.56□□□□□ -0.88
ATXN3-226ENST00000554350 NEURL4Q96JN8 1562 aa9.55□□□□□ -0.88
ATXN3-226ENST00000554350 A2ML1A8K2U0 1454 aa9.55□□□□□ -0.88
ATXN3-226ENST00000554350 WDR4P57081 412 aaKnown RBP9.55□□□□□ -0.88
ATXN3-226ENST00000554350 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
ATXN3-226ENST00000554350 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-226ENST00000554350 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
ATXN3-226ENST00000554350 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
ATXN3-226ENST00000554350 MLH3Q9UHC1 1453 aa9.54□□□□□ -0.88
ATXN3-226ENST00000554350 MEX3CQ5U5Q3 659 aaKnown RBP9.54□□□□□ -0.88
ATXN3-226ENST00000554350 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
ATXN3-226ENST00000554350 CDK13Q14004 1512 aaKnown RBP9.54□□□□□ -0.88
ATXN3-226ENST00000554350 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
ATXN3-226ENST00000554350 GGT6Q6P531 493 aa9.53□□□□□ -0.88
ATXN3-226ENST00000554350 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
ATXN3-226ENST00000554350 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-226ENST00000554350 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
ATXN3-226ENST00000554350 NXF1Q9UBU9 619 aaKnown RBP9.53□□□□□ -0.88
ATXN3-226ENST00000554350 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms