RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-204	ENST00000554178	EXOC5	O00471	708 aa		13.97	□□□□□ -0.17
PTPN21-204	ENST00000554178	MTFR1L	Q9H019	292 aa		13.97	□□□□□ -0.17
PTPN21-204	ENST00000554178	CD163L1	Q9NR16	1453 aa		13.96	□□□□□ -0.17
PTPN21-204	ENST00000554178	PELP1	Q8IZL8	1130 aa	Known RBP	13.96	□□□□□ -0.17
PTPN21-204	ENST00000554178	KCNH5	Q8NCM2	988 aa		13.96	□□□□□ -0.17
PTPN21-204	ENST00000554178	SGIP1	Q9BQI5	828 aa		13.96	□□□□□ -0.17
PTPN21-204	ENST00000554178	NLRP2	Q9NX02	1062 aa		13.96	□□□□□ -0.17
PTPN21-204	ENST00000554178	TTC21A	Q8NDW8	1320 aa		13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	NME9	Q86XW9	330 aa		13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	L3MBTL2	Q969R5	705 aa		13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	ZNF692	Q9BU19	519 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	GOLGB1	Q14789	3259 aa	Known RBP	13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	C5	P01031	1676 aa		13.95	□□□□□ -0.18
PTPN21-204	ENST00000554178	TAF1L	Q8IZX4	1826 aa		13.94	□□□□□ -0.18
PTPN21-204	ENST00000554178	ERBB3	P21860	1342 aa		13.94	□□□□□ -0.18
PTPN21-204	ENST00000554178	FXR2	P51116	673 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
PTPN21-204	ENST00000554178	ARX	Q96QS3	562 aa		13.94	□□□□□ -0.18
PTPN21-204	ENST00000554178	KCNQ4	P56696	695 aa		13.93	□□□□□ -0.18
PTPN21-204	ENST00000554178	SIN3A	Q96ST3	1273 aa		13.93	□□□□□ -0.18
PTPN21-204	ENST00000554178	LRRC4B	Q9NT99	713 aa		13.92	□□□□□ -0.18
PTPN21-204	ENST00000554178	IL2RB	P14784	551 aa		13.91	□□□□□ -0.18
PTPN21-204	ENST00000554178	ANKRD24	Q8TF21	1146 aa		13.91	□□□□□ -0.18
PTPN21-204	ENST00000554178	SSUH2	Q9Y2M2	353 aa		13.91	□□□□□ -0.18
PTPN21-204	ENST00000554178	SBNO2	Q9Y2G9	1366 aa		13.91	□□□□□ -0.18
PTPN21-204	ENST00000554178	ITGB4	P16144	1822 aa		13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	KIF20B	Q96Q89	1820 aa		13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	NEUROD1	Q13562	356 aa		13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	GPR162	Q16538	588 aa		13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	LTV1	Q96GA3	475 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	TOGARAM1	Q9Y4F4	1720 aa		13.9	□□□□□ -0.18
PTPN21-204	ENST00000554178	USP31	Q70CQ4	1352 aa		13.89	□□□□□ -0.19
PTPN21-204	ENST00000554178	MAP3K5	Q99683	1374 aa		13.89	□□□□□ -0.19
PTPN21-204	ENST00000554178	C1QTNF8	P60827	252 aa		13.89	□□□□□ -0.19
PTPN21-204	ENST00000554178	TMC1	Q8TDI8	760 aa		13.89	□□□□□ -0.19
PTPN21-204	ENST00000554178	PNPLA7	Q6ZV29	1317 aa		13.89	□□□□□ -0.19
PTPN21-204	ENST00000554178		A0A1W2PP64	1363 aa		13.88	□□□□□ -0.19
PTPN21-204	ENST00000554178	NLGN2	Q8NFZ4	835 aa		13.88	□□□□□ -0.19
PTPN21-204	ENST00000554178	SYTL4	Q96C24	671 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN21-204	ENST00000554178	MEGF6	O75095	1541 aa		13.88	□□□□□ -0.19
PTPN21-204	ENST00000554178	DDX54	Q8TDD1	881 aa	Known RBP	13.87	□□□□□ -0.19
PTPN21-204	ENST00000554178	EDC4	Q6P2E9	1401 aa	Known RBP	13.87	□□□□□ -0.19
PTPN21-204	ENST00000554178	CLEC11A	Q9Y240	323 aa		13.86	□□□□□ -0.19
PTPN21-204	ENST00000554178	NSD2	O96028	1365 aa		13.85	□□□□□ -0.19
PTPN21-204	ENST00000554178	GIGYF1	O75420	1035 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN21-204	ENST00000554178	CEP350	Q5VT06	3117 aa		13.85	□□□□□ -0.19
PTPN21-204	ENST00000554178	UBR3	Q6ZT12	1888 aa		13.84	□□□□□ -0.19
PTPN21-204	ENST00000554178	POLD1	P28340	1107 aa		13.84	□□□□□ -0.19
PTPN21-204	ENST00000554178	MSL1	Q68DK7	614 aa		13.84	□□□□□ -0.19
PTPN21-204	ENST00000554178	SLC12A5	Q9H2X9	1139 aa		13.84	□□□□□ -0.19
PTPN21-204	ENST00000554178	TFCP2L1	Q9NZI6	479 aa		13.83	□□□□□ -0.2
PTPN21-204	ENST00000554178	C4B	P0C0L5	1744 aa		13.82	□□□□□ -0.2
PTPN21-204	ENST00000554178	YBX3	P16989	372 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PTPN21-204	ENST00000554178	FBLN1	P23142	703 aa		13.82	□□□□□ -0.2
PTPN21-204	ENST00000554178	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.82	□□□□□ -0.2
PTPN21-204	ENST00000554178	ANKRD36B	Q8N2N9	1353 aa		13.82	□□□□□ -0.2
PTPN21-204	ENST00000554178	PRIM1	P49642	420 aa	Known RBP	13.81	□□□□□ -0.2
PTPN21-204	ENST00000554178	USHBP1	Q8N6Y0	703 aa		13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	CARD11	Q9BXL7	1154 aa		13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	WWC3	Q9ULE0	1092 aa		13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	PKD1L3	Q7Z443	1732 aa		13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	ATP10D	Q9P241	1426 aa		13.8	□□□□□ -0.2
PTPN21-204	ENST00000554178	SLC27A3	Q5K4L6	730 aa		13.79	□□□□□ -0.2
PTPN21-204	ENST00000554178	CCNL1	Q9UK58	526 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN21-204	ENST00000554178	MAP3K19	Q56UN5	1328 aa		13.79	□□□□□ -0.2
PTPN21-204	ENST00000554178	IP6K1	Q92551	441 aa		13.78	□□□□□ -0.2
PTPN21-204	ENST00000554178	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN21-204	ENST00000554178	HAX1	O00165	279 aa		13.77	□□□□□ -0.21
PTPN21-204	ENST00000554178	HOXC9	P31274	260 aa		13.77	□□□□□ -0.21
PTPN21-204	ENST00000554178	ZNF526	Q8TF50	670 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN21-204	ENST00000554178	SLC16A10	Q8TF71	515 aa		13.77	□□□□□ -0.21
PTPN21-204	ENST00000554178	MAP2	P11137	1827 aa	Known RBP	13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	USP47	Q96K76	1375 aa		13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	AMPH	P49418	695 aa		13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	COL23A1	Q86Y22	540 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	SP7	Q8TDD2	431 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	TERF2IP	Q9NYB0	399 aa		13.76	□□□□□ -0.21
PTPN21-204	ENST00000554178	RRS1	Q15050	365 aa	Known RBP	13.75	□□□□□ -0.21
PTPN21-204	ENST00000554178	KIAA1551	Q9HCM1	1747 aa		13.75	□□□□□ -0.21
PTPN21-204	ENST00000554178	ANKRD26	Q9UPS8	1709 aa		13.74	□□□□□ -0.21
PTPN21-204	ENST00000554178	SMIM5	Q71RC9	77 aa		13.74	□□□□□ -0.21
PTPN21-204	ENST00000554178	ZCRB1	Q8TBF4	217 aa	Known RBP	13.74	□□□□□ -0.21
PTPN21-204	ENST00000554178	COG3	Q96JB2	828 aa		13.74	□□□□□ -0.21
PTPN21-204	ENST00000554178	PRKAR2A	P13861	404 aa	Known RBP	13.73	□□□□□ -0.21
PTPN21-204	ENST00000554178	SMG6	Q86US8	1419 aa	Known RBP	13.73	□□□□□ -0.21
PTPN21-204	ENST00000554178	RTL1	A6NKG5	1358 aa		13.72	□□□□□ -0.21
PTPN21-204	ENST00000554178	PALLD	Q8WX93	1383 aa		13.72	□□□□□ -0.21
PTPN21-204	ENST00000554178	EVX2	Q03828	476 aa		13.72	□□□□□ -0.21
PTPN21-204	ENST00000554178	TONSL	Q96HA7	1378 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	KIF13B	Q9NQT8	1826 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	PHF14	O94880	888 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	NBPF6	Q5VWK0	638 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	AMIGO3	Q86WK7	504 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	NBPF4	Q96M43	638 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	GGNBP2	Q9H3C7	697 aa		13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	BRCA1	P38398	1863 aa	Known RBP	13.71	□□□□□ -0.21
PTPN21-204	ENST00000554178	ADCY9	O60503	1353 aa		13.71	□□□□□ -0.22
PTPN21-204	ENST00000554178	C4A	P0C0L4	1744 aa		13.7	□□□□□ -0.22
PTPN21-204	ENST00000554178	IFFO2	Q5TF58	517 aa		13.7	□□□□□ -0.22
PTPN21-204	ENST00000554178	GRIN3B	O60391	1043 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms