RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 V9GY48 417 aaPredicted RBP6.56□□□□□ -1.36
EFCAB11-204ENST00000553871 PTK7Q13308 1070 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 ANKMY2Q8IV38 441 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 LARGE2Q8N3Y3 721 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 CYLDQ9NQC7 956 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 ZMIZ1Q9ULJ6 1067 aa6.55□□□□□ -1.36
EFCAB11-204ENST00000553871 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 SIAH2O43255 324 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 CLDN10P78369 228 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 DPYDQ12882 1025 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 TMEM164Q5U3C3 297 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 CC2D2BQ6DHV5 1058 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 TPCN2Q8NHX9 752 aa6.54□□□□□ -1.36
EFCAB11-204ENST00000553871 GRM5P41594 1212 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 SCTRP47872 440 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 MYT1Q01538 1121 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 PPP1R26Q5T8A7 1209 aaPredicted RBP6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 CCDC102BQ68D86 513 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 CYP4X1Q8N118 509 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 ZNF784Q8NCA9 323 aaPredicted RBP6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 TMPRSS4Q9NRS4 437 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 EMILIN1Q9Y6C2 1016 aa6.53□□□□□ -1.36
EFCAB11-204ENST00000553871 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 PATL2C9JE40 543 aaKnown RBP6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 SEC13P55735 322 aa6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 TRIM26Q12899 539 aaPredicted RBP6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 NNTQ13423 1086 aa6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 SIX5Q8N196 739 aa6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 SNIP1Q8TAD8 396 aaKnown RBP6.52□□□□□ -1.37
EFCAB11-204ENST00000553871 TMEM88BA6NKF7 163 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 TNFRSF10AO00220 468 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 BRD1O95696 1058 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 NR3C2P08235 984 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 CYP2U1Q7Z449 544 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 PKD2L1Q9P0L9 805 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 KIAA1024Q9UPX6 916 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 PCDHGA11Q9Y5H2 935 aa6.51□□□□□ -1.37
EFCAB11-204ENST00000553871 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
EFCAB11-204ENST00000553871 SFI1A8K8P3 1242 aa6.49□□□□□ -1.37
EFCAB11-204ENST00000553871 ZBTB7BO15156 539 aaPredicted RBP6.49□□□□□ -1.37
EFCAB11-204ENST00000553871 HINFPQ9BQA5 517 aa6.49□□□□□ -1.37
EFCAB11-204ENST00000553871 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
EFCAB11-204ENST00000553871 PODXL2Q9NZ53 605 aa6.49□□□□□ -1.37
EFCAB11-204ENST00000553871 KCNA1Q09470 495 aa6.48□□□□□ -1.37
EFCAB11-204ENST00000553871 ESCO1Q5FWF5 840 aa6.48□□□□□ -1.37
EFCAB11-204ENST00000553871 CLP1Q92989 425 aaKnown RBP6.48□□□□□ -1.37
EFCAB11-204ENST00000553871 J3QL48 77 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 BACH1O14867 736 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 GDF9O60383 454 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 LILRA1O75019 489 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 ZIC2O95409 532 aaPredicted RBP6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 ATP2B4P23634 1241 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 GDF10P55107 478 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 ZNF358Q9NW07 568 aa6.47□□□□□ -1.37
EFCAB11-204ENST00000553871 PRMT3O60678 531 aa6.46□□□□□ -1.38
EFCAB11-204ENST00000553871 GNRH1P01148 92 aa6.46□□□□□ -1.38
EFCAB11-204ENST00000553871 ADH1AP07327 375 aa6.46□□□□□ -1.38
EFCAB11-204ENST00000553871 TSEN2Q8NCE0 465 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-204ENST00000553871 ARHGEF10LQ9HCE6 1279 aa6.46□□□□□ -1.38
EFCAB11-204ENST00000553871 M0R2N6 131 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 PRR20EP86478 221 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 PRR20CP86479 221 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 PRR20DP86480 221 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 PRR20BP86481 221 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 PRR20AP86496 221 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 FAM69CQ0P6D2 419 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 ITPKCQ96DU7 683 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 RAB6BQ9NRW1 208 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 TOR4AQ9NXH8 423 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 SERTAD1Q9UHV2 236 aa6.45□□□□□ -1.38
EFCAB11-204ENST00000553871 TMEM229AB2RXF0 380 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 LGR5O75473 907 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 DKK1O94907 266 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 INHAP05111 366 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 SCNN1DP51172 638 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 CBLBQ13191 982 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 ETNK1Q9HBU6 452 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
EFCAB11-204ENST00000553871 MEN1O00255 615 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 RGS20O76081 388 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 STAU1O95793 577 aaKnown RBP6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 SMPD1P17405 629 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 RELBQ01201 579 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 PDZRN3Q9UPQ7 1066 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 IVNS1ABPQ9Y6Y0 642 aa6.43□□□□□ -1.38
EFCAB11-204ENST00000553871 UPP2O95045 317 aa6.42□□□□□ -1.38
EFCAB11-204ENST00000553871 TIMP2P16035 220 aa6.42□□□□□ -1.38
EFCAB11-204ENST00000553871 SSFA2P28290 1259 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms