RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 KCNQ2O43526 872 aa19.42■□□□□ 0.7
PRKCH-207ENST00000553831 ZCRB1Q8TBF4 217 aaKnown RBP19.42■□□□□ 0.7
PRKCH-207ENST00000553831 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
PRKCH-207ENST00000553831 EIF4A2Q14240 407 aaKnown RBP19.41■□□□□ 0.7
PRKCH-207ENST00000553831 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
PRKCH-207ENST00000553831 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
PRKCH-207ENST00000553831 SRCAPQ6ZRS2 3230 aa19.4■□□□□ 0.7
PRKCH-207ENST00000553831 NUP188Q5SRE5 1749 aa19.4■□□□□ 0.7
PRKCH-207ENST00000553831 EYA1Q99502 592 aa19.4■□□□□ 0.7
PRKCH-207ENST00000553831 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
PRKCH-207ENST00000553831 PLSCR1O15162 318 aa19.38■□□□□ 0.69
PRKCH-207ENST00000553831 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
PRKCH-207ENST00000553831 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
PRKCH-207ENST00000553831 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
PRKCH-207ENST00000553831 DOT1LQ8TEK3 1739 aa19.36■□□□□ 0.69
PRKCH-207ENST00000553831 BTAF1O14981 1849 aa19.35■□□□□ 0.69
PRKCH-207ENST00000553831 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
PRKCH-207ENST00000553831 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
PRKCH-207ENST00000553831 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
PRKCH-207ENST00000553831 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
PRKCH-207ENST00000553831 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
PRKCH-207ENST00000553831 KAT6BQ8WYB5 2073 aa19.34■□□□□ 0.69
PRKCH-207ENST00000553831 PROM2Q8N271 834 aa19.33■□□□□ 0.68
PRKCH-207ENST00000553831 CYP27B1O15528 508 aa19.32■□□□□ 0.68
PRKCH-207ENST00000553831 MTHFSP49914 203 aa19.32■□□□□ 0.68
PRKCH-207ENST00000553831 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
PRKCH-207ENST00000553831 TXNRD1Q16881 649 aa19.31■□□□□ 0.68
PRKCH-207ENST00000553831 SYTL4Q96C24 671 aaPredicted RBP19.31■□□□□ 0.68
PRKCH-207ENST00000553831 IL13P35225 146 aa19.3■□□□□ 0.68
PRKCH-207ENST00000553831 NBPF14Q5TI25 921 aa19.3■□□□□ 0.68
PRKCH-207ENST00000553831 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
PRKCH-207ENST00000553831 SPG7Q9UQ90 795 aa19.29■□□□□ 0.68
PRKCH-207ENST00000553831 AEBP1Q8IUX7 1158 aa19.28■□□□□ 0.68
PRKCH-207ENST00000553831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.68
PRKCH-207ENST00000553831 PLEKHG2Q9H7P9 1386 aa19.28■□□□□ 0.68
PRKCH-207ENST00000553831 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
PRKCH-207ENST00000553831 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
PRKCH-207ENST00000553831 KDRP35968 1356 aa19.25■□□□□ 0.67
PRKCH-207ENST00000553831 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
PRKCH-207ENST00000553831 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
PRKCH-207ENST00000553831 PHKG2P15735 406 aa19.24■□□□□ 0.67
PRKCH-207ENST00000553831 NKX1-1Q15270 411 aaPredicted RBP19.24■□□□□ 0.67
PRKCH-207ENST00000553831 LRP5O75197 1615 aa19.24■□□□□ 0.67
PRKCH-207ENST00000553831 IFNL2Q8IZJ0 200 aa19.23■□□□□ 0.67
PRKCH-207ENST00000553831 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
PRKCH-207ENST00000553831 LRRC4BQ9NT99 713 aa19.22■□□□□ 0.67
PRKCH-207ENST00000553831 LY75O60449 1722 aa19.21■□□□□ 0.67
PRKCH-207ENST00000553831 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
PRKCH-207ENST00000553831 MPRIPQ6WCQ1 1025 aa19.21■□□□□ 0.67
PRKCH-207ENST00000553831 ITGB4P16144 1822 aa19.21■□□□□ 0.67
PRKCH-207ENST00000553831 SLC15A2Q16348 729 aa19.2■□□□□ 0.66
PRKCH-207ENST00000553831 SLC27A3Q5K4L6 730 aa19.2■□□□□ 0.66
PRKCH-207ENST00000553831 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
PRKCH-207ENST00000553831 STK32BQ9NY57 414 aa19.2■□□□□ 0.66
PRKCH-207ENST00000553831 HMOX1P09601 288 aa19.19■□□□□ 0.66
PRKCH-207ENST00000553831 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
PRKCH-207ENST00000553831 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
PRKCH-207ENST00000553831 KCNQ4P56696 695 aa19.18■□□□□ 0.66
PRKCH-207ENST00000553831 CASZ1Q86V15 1759 aa19.18■□□□□ 0.66
PRKCH-207ENST00000553831 ZNF827Q17R98 1081 aa19.17■□□□□ 0.66
PRKCH-207ENST00000553831 PIGBQ92521 554 aa19.17■□□□□ 0.66
PRKCH-207ENST00000553831 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
PRKCH-207ENST00000553831 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
PRKCH-207ENST00000553831 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
PRKCH-207ENST00000553831 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
PRKCH-207ENST00000553831 TMOD3Q9NYL9 352 aa19.16■□□□□ 0.66
PRKCH-207ENST00000553831 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
PRKCH-207ENST00000553831 HSP90AB1P08238 724 aaKnown RBP19.15■□□□□ 0.66
PRKCH-207ENST00000553831 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
PRKCH-207ENST00000553831 C1orf141Q5JVX7 400 aa19.14■□□□□ 0.65
PRKCH-207ENST00000553831 DCAF5Q96JK2 942 aa19.14■□□□□ 0.65
PRKCH-207ENST00000553831 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
PRKCH-207ENST00000553831 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
PRKCH-207ENST00000553831 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
PRKCH-207ENST00000553831 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
PRKCH-207ENST00000553831 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
PRKCH-207ENST00000553831 TUBGCP6Q96RT7 1819 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 ZBTB7AO95365 584 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 SPON1Q9HCB6 807 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 ASAP1Q9ULH1 1129 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 C5P01031 1676 aa19.1■□□□□ 0.65
PRKCH-207ENST00000553831 MTHFSDQ2M296 383 aaKnown RBP19.09■□□□□ 0.65
PRKCH-207ENST00000553831 ATG3Q9NT62 314 aa19.09■□□□□ 0.65
PRKCH-207ENST00000553831 QSER1Q2KHR3 1735 aa19.08■□□□□ 0.65
PRKCH-207ENST00000553831 CABP4P57796 275 aa19.08■□□□□ 0.64
PRKCH-207ENST00000553831 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
PRKCH-207ENST00000553831 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
PRKCH-207ENST00000553831 PNPLA7Q6ZV29 1317 aa19.07■□□□□ 0.64
PRKCH-207ENST00000553831 LOC102724428A0A0B4J2F2 783 aa19.07■□□□□ 0.64
PRKCH-207ENST00000553831 SIK1P57059 783 aa19.07■□□□□ 0.64
PRKCH-207ENST00000553831 TFCP2L1Q9NZI6 479 aa19.07■□□□□ 0.64
PRKCH-207ENST00000553831 SCN11AQ9UI33 1791 aa19.06■□□□□ 0.64
PRKCH-207ENST00000553831 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
PRKCH-207ENST00000553831 MRC1P22897 1456 aa19.05■□□□□ 0.64
PRKCH-207ENST00000553831 MTFR1LQ9H019 292 aa19.05■□□□□ 0.64
PRKCH-207ENST00000553831 ATF5Q9Y2D1 282 aaPredicted RBP19.05■□□□□ 0.64
PRKCH-207ENST00000553831 C4BP0C0L5 1744 aa19.05■□□□□ 0.64
PRKCH-207ENST00000553831 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
PRKCH-207ENST00000553831 U2AF1L5P0DN76 240 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms