RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CFAP54-204ENST00000553778 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
CFAP54-204ENST00000553778 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
CFAP54-204ENST00000553778 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
CFAP54-204ENST00000553778 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
CFAP54-204ENST00000553778 SOX12O15370 315 aa12.55□□□□□ -0.4
CFAP54-204ENST00000553778 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
CFAP54-204ENST00000553778 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
CFAP54-204ENST00000553778 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
CFAP54-204ENST00000553778 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
CFAP54-204ENST00000553778 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
CFAP54-204ENST00000553778 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
CFAP54-204ENST00000553778 KIF20AO95235 890 aa12.54□□□□□ -0.4
CFAP54-204ENST00000553778 USP21Q9UK80 565 aa12.54□□□□□ -0.4
CFAP54-204ENST00000553778 AFF2P51816 1311 aa12.54□□□□□ -0.4
CFAP54-204ENST00000553778 ZNF500O60304 480 aaPredicted RBP12.53□□□□□ -0.4
CFAP54-204ENST00000553778 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
CFAP54-204ENST00000553778 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.4
CFAP54-204ENST00000553778 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
CFAP54-204ENST00000553778 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
CFAP54-204ENST00000553778 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
CFAP54-204ENST00000553778 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
CFAP54-204ENST00000553778 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.41
CFAP54-204ENST00000553778 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
CFAP54-204ENST00000553778 SLIT3O75094 1523 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 CPDO75976 1380 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 ARHGEF25Q86VW2 580 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 UNC5CLQ8IV45 518 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 RGS17Q9UGC6 210 aaPredicted RBP12.51□□□□□ -0.41
CFAP54-204ENST00000553778 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
CFAP54-204ENST00000553778 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
CFAP54-204ENST00000553778 SEC24BO95487 1268 aa12.5□□□□□ -0.41
CFAP54-204ENST00000553778 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
CFAP54-204ENST00000553778 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
CFAP54-204ENST00000553778 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
CFAP54-204ENST00000553778 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
CFAP54-204ENST00000553778 MCM5P33992 734 aa12.5□□□□□ -0.41
CFAP54-204ENST00000553778 EVA1CP58658 441 aa12.5□□□□□ -0.41
CFAP54-204ENST00000553778 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
CFAP54-204ENST00000553778 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
CFAP54-204ENST00000553778 MARF1Q9Y4F3 1742 aaKnown RBP12.49□□□□□ -0.41
CFAP54-204ENST00000553778 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 TAF3Q5VWG9 929 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 ARXQ96QS3 562 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
CFAP54-204ENST00000553778 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
CFAP54-204ENST00000553778 NSD2O96028 1365 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 DDIT3P35638 169 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
CFAP54-204ENST00000553778 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
CFAP54-204ENST00000553778 FBLN1P23142 703 aa12.48□□□□□ -0.41
CFAP54-204ENST00000553778 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
CFAP54-204ENST00000553778 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
CFAP54-204ENST00000553778 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
CFAP54-204ENST00000553778 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CFAP54-204ENST00000553778 SLIT2O94813 1529 aa12.48□□□□□ -0.41
CFAP54-204ENST00000553778 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 AMPHP49418 695 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 COL14A1Q05707 1796 aaKnown RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 KCNA4P22459 653 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 GBP4Q96PP9 640 aa12.47□□□□□ -0.41
CFAP54-204ENST00000553778 CCDC9Q9Y3X0 531 aaKnown RBP12.47□□□□□ -0.41
CFAP54-204ENST00000553778 RXRBP28702 533 aa12.46□□□□□ -0.41
CFAP54-204ENST00000553778 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.41
CFAP54-204ENST00000553778 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
CFAP54-204ENST00000553778 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 VPS72Q15906 364 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 GAS2L3Q86XJ1 694 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 IP6K1Q92551 441 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 NFAT5O94916 1531 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 UQCRHP07919 91 aa12.45□□□□□ -0.42
CFAP54-204ENST00000553778 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
CFAP54-204ENST00000553778 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
CFAP54-204ENST00000553778 IPO4Q8TEX9 1081 aaKnown RBP12.45□□□□□ -0.42
CFAP54-204ENST00000553778 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
CFAP54-204ENST00000553778 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
CFAP54-204ENST00000553778 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
CFAP54-204ENST00000553778 IGHDP01880 384 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 SLFN5Q08AF3 891 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms