RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
LINC-ROR-201ENST00000553704 CDC45O75419 566 aa8.64□□□□□ -1.03
LINC-ROR-201ENST00000553704 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
LINC-ROR-201ENST00000553704 TTC21BQ7Z4L5 1316 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 RGPD8O14715 1765 aaPredicted RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 SOX12O15370 315 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 RAB3GAP1Q15042 981 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 ACEP12821 1306 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 USP6P35125 1406 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 CRB1P82279 1406 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 K7ELQ4 463 aaPredicted RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 SMARCA5O60264 1052 aaPredicted RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 DCTPP1Q9H773 170 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 FAM208AQ9UK61 1670 aaKnown RBP8.63□□□□□ -1.03
LINC-ROR-201ENST00000553704 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 TNRQ92752 1358 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 TUBGCP6Q96RT7 1819 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 APBB1O00213 710 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 FOXO3O43524 673 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 TTC22Q5TAA0 569 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 CEP85Q6P2H3 762 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 KLHL34Q8N239 644 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 MEIS3Q99687 375 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 CEP170BQ9Y4F5 1589 aaPredicted RBP8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 CHL1O00533 1208 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 SSFA2P28290 1259 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 ANKRD44Q8N8A2 993 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 MIS18AQ9NYP9 233 aa8.62□□□□□ -1.03
LINC-ROR-201ENST00000553704 PTPRUQ92729 1446 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 PIK3C2AO00443 1686 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 MAP3K19Q56UN5 1328 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 LRRC37A3O60309 1634 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 GAS2L3Q86XJ1 694 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 SIRT1Q96EB6 747 aa8.61□□□□□ -1.03
LINC-ROR-201ENST00000553704 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 G2E3Q7L622 706 aa8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 SSH2Q76I76 1423 aa8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 USP31Q70CQ4 1352 aa8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 GRPEL1Q9HAV7 217 aa8.6□□□□□ -1.03
LINC-ROR-201ENST00000553704 F6X3S4 739 aa8.59□□□□□ -1.03
LINC-ROR-201ENST00000553704 SDSP20132 328 aa8.59□□□□□ -1.03
LINC-ROR-201ENST00000553704 LTKP29376 864 aa8.59□□□□□ -1.03
LINC-ROR-201ENST00000553704 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 MRE11P49959 708 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 PKP1Q13835 747 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 MTHFSDQ2M296 383 aaKnown RBP8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 GBP4Q96PP9 640 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 DIP2AQ14689 1571 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 PLEKHG3A1L390 1219 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 PTPRCP08575 1304 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 PLEKHG1Q9ULL1 1385 aa8.58□□□□□ -1.04
LINC-ROR-201ENST00000553704 TSHZ3Q63HK5 1081 aa8.57□□□□□ -1.04
LINC-ROR-201ENST00000553704 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
LINC-ROR-201ENST00000553704 SLC4A10Q6U841 1118 aa8.57□□□□□ -1.04
LINC-ROR-201ENST00000553704 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
LINC-ROR-201ENST00000553704 NWD1Q149M9 1564 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 BAG4O95429 457 aaKnown RBP8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 RABEP1Q15276 862 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 KDRP35968 1356 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 SBNO1A3KN83 1393 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 FLT4P35916 1363 aa8.56□□□□□ -1.04
LINC-ROR-201ENST00000553704 ZGPATQ8N5A5 531 aaKnown RBP8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 CHAMP1Q96JM3 812 aa8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 EXOC6BQ9Y2D4 811 aa8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 CYP2E1P05181 493 aaPredicted RBP8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 CEBPAP49715 358 aaPredicted RBP8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 EYA1Q99502 592 aa8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
LINC-ROR-201ENST00000553704 CLEC17AQ6ZS10 378 aa8.54□□□□□ -1.04
LINC-ROR-201ENST00000553704 NECTIN2Q92692 538 aa8.54□□□□□ -1.04
LINC-ROR-201ENST00000553704 SALL3Q9BXA9 1300 aa8.54□□□□□ -1.04
LINC-ROR-201ENST00000553704 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
LINC-ROR-201ENST00000553704 PDE1AP54750 535 aa8.54□□□□□ -1.04
LINC-ROR-201ENST00000553704 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 RTF1Q92541 710 aaKnown RBP8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 ZDHHC9Q9Y397 364 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms