RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 Q6ZVU0 165 aa9.09□□□□□ -0.95
SCFD1-210ENST00000553693 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
SCFD1-210ENST00000553693 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
SCFD1-210ENST00000553693 GPR37L1O60883 481 aa9.08□□□□□ -0.96
SCFD1-210ENST00000553693 MARSP56192 900 aaKnown RBP9.08□□□□□ -0.96
SCFD1-210ENST00000553693 MSTNO14793 375 aa9.07□□□□□ -0.96
SCFD1-210ENST00000553693 CBLBQ13191 982 aa9.07□□□□□ -0.96
SCFD1-210ENST00000553693 PLA2G4EQ3MJ16 856 aa9.07□□□□□ -0.96
SCFD1-210ENST00000553693 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-210ENST00000553693 SPOCK3Q9BQ16 436 aa9.07□□□□□ -0.96
SCFD1-210ENST00000553693 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
SCFD1-210ENST00000553693 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
SCFD1-210ENST00000553693 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-210ENST00000553693 TBC1D2BQ9UPU7 963 aa9.05□□□□□ -0.96
SCFD1-210ENST00000553693 PROCP04070 461 aa9.04□□□□□ -0.96
SCFD1-210ENST00000553693 Q8N3U1 123 aa9.04□□□□□ -0.96
SCFD1-210ENST00000553693 TMPRSS4Q9NRS4 437 aa9.04□□□□□ -0.96
SCFD1-210ENST00000553693 SPINT1O43278 529 aa9.03□□□□□ -0.96
SCFD1-210ENST00000553693 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-210ENST00000553693 ADH1AP07327 375 aa9.03□□□□□ -0.96
SCFD1-210ENST00000553693 PTSQ03393 145 aa9.03□□□□□ -0.96
SCFD1-210ENST00000553693 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
SCFD1-210ENST00000553693 MCM6Q14566 821 aa9.02□□□□□ -0.97
SCFD1-210ENST00000553693 LILRA1O75019 489 aa9.01□□□□□ -0.97
SCFD1-210ENST00000553693 RELBQ01201 579 aa9.01□□□□□ -0.97
SCFD1-210ENST00000553693 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.972e-7■□□□□ 8.5
SCFD1-210ENST00000553693 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
SCFD1-210ENST00000553693 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
SCFD1-210ENST00000553693 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
SCFD1-210ENST00000553693 LYPD4Q6UWN0 246 aa9□□□□□ -0.97
SCFD1-210ENST00000553693 DCAF5Q96JK2 942 aa9□□□□□ -0.97
SCFD1-210ENST00000553693 ABL2P42684 1182 aa8.98□□□□□ -0.97
SCFD1-210ENST00000553693 CCDC155Q8N6L0 562 aa8.98□□□□□ -0.97
SCFD1-210ENST00000553693 GDPD2Q9HCC8 539 aa8.98□□□□□ -0.97
SCFD1-210ENST00000553693 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
SCFD1-210ENST00000553693 ADD1P35611 737 aaKnown RBP8.97□□□□□ -0.97
SCFD1-210ENST00000553693 PTGIRP43119 386 aa8.97□□□□□ -0.97
SCFD1-210ENST00000553693 ERVK-9P63128 1117 aa8.97□□□□□ -0.97
SCFD1-210ENST00000553693 IRF5Q13568 498 aa8.97□□□□□ -0.97
SCFD1-210ENST00000553693 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
SCFD1-210ENST00000553693 CC2D2BQ6DHV5 1058 aa8.97□□□□□ -0.97
SCFD1-210ENST00000553693 INSM2Q96T92 566 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-210ENST00000553693 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
SCFD1-210ENST00000553693 POLMQ9NP87 494 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-210ENST00000553693 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-210ENST00000553693 VWA5B2Q8N398 1253 aa8.96□□□□□ -0.98
SCFD1-210ENST00000553693 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-210ENST00000553693 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
SCFD1-210ENST00000553693 ATP5J2-PTCD1G3V325 749 aa8.95□□□□□ -0.98
SCFD1-210ENST00000553693 CTSOP43234 321 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-210ENST00000553693 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
SCFD1-210ENST00000553693 SLC35F4A4IF30 521 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 FLIIQ13045 1269 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 TMEM132AQ24JP5 1023 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
SCFD1-210ENST00000553693 SOX11P35716 441 aa8.93□□□□□ -0.98
SCFD1-210ENST00000553693 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
SCFD1-210ENST00000553693 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
SCFD1-210ENST00000553693 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
SCFD1-210ENST00000553693 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-210ENST00000553693 CELA2BP08218 269 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-210ENST00000553693 ITGA6P23229 1130 aa8.92□□□□□ -0.98
SCFD1-210ENST00000553693 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
SCFD1-210ENST00000553693 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-210ENST00000553693 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
SCFD1-210ENST00000553693 RAD21O60216 631 aa8.91□□□□□ -0.98
SCFD1-210ENST00000553693 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
SCFD1-210ENST00000553693 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-210ENST00000553693 SCTRP47872 440 aa8.9□□□□□ -0.98
SCFD1-210ENST00000553693 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
SCFD1-210ENST00000553693 RNF135Q8IUD6 432 aa8.9□□□□□ -0.98
SCFD1-210ENST00000553693 GALNT6Q8NCL4 622 aa8.9□□□□□ -0.98
SCFD1-210ENST00000553693 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
SCFD1-210ENST00000553693 CDC14CA4D256 554 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 MEN1O00255 615 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 GPC1P35052 558 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-210ENST00000553693 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 LYSMD3Q7Z3D4 306 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-210ENST00000553693 KRTAP4-12Q9BQ66 201 aa8.89□□□□□ -0.99
SCFD1-210ENST00000553693 A0A1W2PRU2 124 aa8.88□□□□□ -0.99
SCFD1-210ENST00000553693 TRAK2O60296 914 aa8.88□□□□□ -0.99
SCFD1-210ENST00000553693 UBTFP17480 764 aaKnown RBP8.88□□□□□ -0.99
SCFD1-210ENST00000553693 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
SCFD1-210ENST00000553693 SRSF11Q05519 484 aaKnown RBP8.88□□□□□ -0.99
SCFD1-210ENST00000553693 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
SCFD1-210ENST00000553693 PHF20L1A8MW92 1017 aa8.87□□□□□ -0.99
SCFD1-210ENST00000553693 CLN3Q13286 438 aa8.87□□□□□ -0.99
SCFD1-210ENST00000553693 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
SCFD1-210ENST00000553693 GNRH1P01148 92 aa8.86□□□□□ -0.99
SCFD1-210ENST00000553693 PHTF2Q8N3S3 785 aa8.86□□□□□ -0.99
SCFD1-210ENST00000553693 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
SCFD1-210ENST00000553693 BAG6P46379 1132 aa8.85□□□□□ -0.99
SCFD1-210ENST00000553693 USP4Q13107 963 aa8.85□□□□□ -0.99
SCFD1-210ENST00000553693 GAS6Q14393 721 aa8.85□□□□□ -0.99
SCFD1-210ENST00000553693 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms