RNA–Protein interactions for RNA: ENST00000553623.1

LINC00523-203, long intergenic non-protein coding RNA 523, humanhuman

TSL 3

Gene LINC00523, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00523-203ENST00000553623 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
LINC00523-203ENST00000553623 DDX17Q92841 729 aaKnown RBP13□□□□□ -0.33
LINC00523-203ENST00000553623 NBPF4Q96M43 638 aa13□□□□□ -0.33
LINC00523-203ENST00000553623 BABAM1Q9NWV8 329 aa13□□□□□ -0.33
LINC00523-203ENST00000553623 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
LINC00523-203ENST00000553623 ERBB3P21860 1342 aa12.99□□□□□ -0.33
LINC00523-203ENST00000553623 CHL1O00533 1208 aa12.99□□□□□ -0.33
LINC00523-203ENST00000553623 ALDH1L2Q3SY69 923 aa12.99□□□□□ -0.33
LINC00523-203ENST00000553623 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
LINC00523-203ENST00000553623 RBM6P78332 1123 aaKnown RBP12.98□□□□□ -0.33
LINC00523-203ENST00000553623 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
LINC00523-203ENST00000553623 AAMPQ13685 434 aa12.98□□□□□ -0.33
LINC00523-203ENST00000553623 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
LINC00523-203ENST00000553623 KIAA0232Q92628 1395 aa12.97□□□□□ -0.33
LINC00523-203ENST00000553623 BCAR3O75815 825 aa12.97□□□□□ -0.33
LINC00523-203ENST00000553623 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
LINC00523-203ENST00000553623 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
LINC00523-203ENST00000553623 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
LINC00523-203ENST00000553623 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
LINC00523-203ENST00000553623 EP400Q96L91 3159 aa12.97□□□□□ -0.33
LINC00523-203ENST00000553623 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.33
LINC00523-203ENST00000553623 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
LINC00523-203ENST00000553623 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.33
LINC00523-203ENST00000553623 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
LINC00523-203ENST00000553623 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
LINC00523-203ENST00000553623 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
LINC00523-203ENST00000553623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00523-203ENST00000553623 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
LINC00523-203ENST00000553623 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
LINC00523-203ENST00000553623 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 PLIN1O60240 522 aa12.95□□□□□ -0.34
LINC00523-203ENST00000553623 VAMP4O75379 141 aa12.95□□□□□ -0.34
LINC00523-203ENST00000553623 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
LINC00523-203ENST00000553623 MS4A1P11836 297 aa12.94□□□□□ -0.34
LINC00523-203ENST00000553623 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
LINC00523-203ENST00000553623 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
LINC00523-203ENST00000553623 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
LINC00523-203ENST00000553623 LRRC59Q96AG4 307 aaKnown RBP12.94□□□□□ -0.34
LINC00523-203ENST00000553623 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
LINC00523-203ENST00000553623 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
LINC00523-203ENST00000553623 AKAP4Q5JQC9 854 aa12.93□□□□□ -0.34
LINC00523-203ENST00000553623 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
LINC00523-203ENST00000553623 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
LINC00523-203ENST00000553623 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 MCM10Q7L590 875 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
LINC00523-203ENST00000553623 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
LINC00523-203ENST00000553623 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
LINC00523-203ENST00000553623 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
LINC00523-203ENST00000553623 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
LINC00523-203ENST00000553623 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
LINC00523-203ENST00000553623 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
LINC00523-203ENST00000553623 ZKSCAN2Q63HK3 967 aa12.9□□□□□ -0.34
LINC00523-203ENST00000553623 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
LINC00523-203ENST00000553623 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
LINC00523-203ENST00000553623 C8orf37Q96NL8 207 aa12.9□□□□□ -0.34
LINC00523-203ENST00000553623 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
LINC00523-203ENST00000553623 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
LINC00523-203ENST00000553623 WDR17Q8IZU2 1322 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 LRP5O75197 1615 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
LINC00523-203ENST00000553623 LAS1LQ9Y4W2 734 aaKnown RBP12.89□□□□□ -0.35
LINC00523-203ENST00000553623 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
LINC00523-203ENST00000553623 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
LINC00523-203ENST00000553623 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
LINC00523-203ENST00000553623 NGLY1Q96IV0 654 aa12.88□□□□□ -0.35
LINC00523-203ENST00000553623 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
LINC00523-203ENST00000553623 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
LINC00523-203ENST00000553623 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
LINC00523-203ENST00000553623 ZBTB7CA1YPR0 619 aa12.87□□□□□ -0.35
LINC00523-203ENST00000553623 RAPGEF4Q8WZA2 1011 aa12.87□□□□□ -0.35
LINC00523-203ENST00000553623 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
LINC00523-203ENST00000553623 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 HOXB7P09629 217 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 TRIM27P14373 513 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
LINC00523-203ENST00000553623 CCDC125Q86Z20 511 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
LINC00523-203ENST00000553623 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 MEGF6O75095 1541 aa12.86□□□□□ -0.35
LINC00523-203ENST00000553623 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
LINC00523-203ENST00000553623 RLBP1P12271 317 aa12.85□□□□□ -0.35
LINC00523-203ENST00000553623 TATP17735 454 aaPredicted RBP12.85□□□□□ -0.35
LINC00523-203ENST00000553623 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms