RNA–Protein interactions for RNA: ENST00000553416.5

LINC01193-201, Transcript of long intergenic non-protein coding RNA 1193, humanhuman

TSL 1 (best) BASIC

Gene LINC01193, Length 3,401 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01193-201ENST00000553416 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
LINC01193-201ENST00000553416 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ABCC4O15439 1325 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
LINC01193-201ENST00000553416 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
LINC01193-201ENST00000553416 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
LINC01193-201ENST00000553416 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
LINC01193-201ENST00000553416 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
LINC01193-201ENST00000553416 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
LINC01193-201ENST00000553416 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 SNX21Q969T3 373 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 AMOTL2Q9Y2J4 779 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 MAP3K19Q56UN5 1328 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
LINC01193-201ENST00000553416 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
LINC01193-201ENST00000553416 RAB3GAP1Q15042 981 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 RABEP1Q15276 862 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
LINC01193-201ENST00000553416 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 NEO1Q92859 1461 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 LTKP29376 864 aa13.23□□□□□ -0.29
LINC01193-201ENST00000553416 REC8O95072 547 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
LINC01193-201ENST00000553416 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
LINC01193-201ENST00000553416 ARID3AQ99856 593 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 ARHGEF40Q8TER5 1519 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
LINC01193-201ENST00000553416 GNAI2P04899 355 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 LRRFIP2Q9Y608 721 aaKnown RBP13.22□□□□□ -0.29
LINC01193-201ENST00000553416 CHL1O00533 1208 aa13.22□□□□□ -0.29
LINC01193-201ENST00000553416 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
LINC01193-201ENST00000553416 ZMYM3Q14202 1370 aa13.21□□□□□ -0.29
LINC01193-201ENST00000553416 EYA1Q99502 592 aa13.21□□□□□ -0.29
LINC01193-201ENST00000553416 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
LINC01193-201ENST00000553416 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
LINC01193-201ENST00000553416 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.3
LINC01193-201ENST00000553416 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.3
LINC01193-201ENST00000553416 ERC2O15083 957 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 FLIIQ13045 1269 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
LINC01193-201ENST00000553416 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 ARHGAP31Q2M1Z3 1444 aa13.2□□□□□ -0.3
LINC01193-201ENST00000553416 ESPNB1AK53 854 aa13.19□□□□□ -0.3
LINC01193-201ENST00000553416 PDE1AP54750 535 aa13.19□□□□□ -0.3
LINC01193-201ENST00000553416 SKOR2Q2VWA4 1001 aaPredicted RBP13.19□□□□□ -0.3
LINC01193-201ENST00000553416 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
LINC01193-201ENST00000553416 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
LINC01193-201ENST00000553416 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
LINC01193-201ENST00000553416 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
LINC01193-201ENST00000553416 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC01193-201ENST00000553416 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
LINC01193-201ENST00000553416 NEURL4Q96JN8 1562 aa13.18□□□□□ -0.3
LINC01193-201ENST00000553416 MCCP23508 829 aa13.18□□□□□ -0.3
LINC01193-201ENST00000553416 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
LINC01193-201ENST00000553416 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
LINC01193-201ENST00000553416 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
LINC01193-201ENST00000553416 NUCB2P80303 420 aa13.17□□□□□ -0.3
LINC01193-201ENST00000553416 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
LINC01193-201ENST00000553416 PTMAP06454 111 aaKnown RBP13.17□□□□□ -0.3
LINC01193-201ENST00000553416 MX1P20591 662 aa13.17□□□□□ -0.3
LINC01193-201ENST00000553416 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
LINC01193-201ENST00000553416 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
LINC01193-201ENST00000553416 MSNP26038 577 aaKnown RBP13.16□□□□□ -0.3
LINC01193-201ENST00000553416 SYCE3A1L190 88 aa13.16□□□□□ -0.3
LINC01193-201ENST00000553416 KCNJ4P48050 445 aa13.16□□□□□ -0.3
LINC01193-201ENST00000553416 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
LINC01193-201ENST00000553416 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
LINC01193-201ENST00000553416 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 TNRQ92752 1358 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
LINC01193-201ENST00000553416 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 PTPRCP08575 1304 aa13.15□□□□□ -0.3
LINC01193-201ENST00000553416 TEFQ10587 303 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 GNAI3P08754 354 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
LINC01193-201ENST00000553416 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
LINC01193-201ENST00000553416 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
LINC01193-201ENST00000553416 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
LINC01193-201ENST00000553416 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms