RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 KCNQ2O43526 872 aa18.01■□□□□ 0.47
HNRNPC-205ENST00000553300 NHSQ6T4R5 1651 aa18.01■□□□□ 0.47
HNRNPC-205ENST00000553300 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
HNRNPC-205ENST00000553300 ACSBG1Q96GR2 724 aa18■□□□□ 0.47
HNRNPC-205ENST00000553300 MEGF6O75095 1541 aa17.99■□□□□ 0.47
HNRNPC-205ENST00000553300 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
HNRNPC-205ENST00000553300 MORC1Q86VD1 984 aa17.99■□□□□ 0.47
HNRNPC-205ENST00000553300 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
HNRNPC-205ENST00000553300 TXNRD1Q16881 649 aa17.98■□□□□ 0.47
HNRNPC-205ENST00000553300 PROM2Q8N271 834 aa17.97■□□□□ 0.47
HNRNPC-205ENST00000553300 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.47
HNRNPC-205ENST00000553300 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.47
HNRNPC-205ENST00000553300 LRP5O75197 1615 aa17.96■□□□□ 0.47
HNRNPC-205ENST00000553300 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
HNRNPC-205ENST00000553300 EYA1Q99502 592 aa17.95■□□□□ 0.46
HNRNPC-205ENST00000553300 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
HNRNPC-205ENST00000553300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.464e-12■■■□□ 16.5
HNRNPC-205ENST00000553300 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
HNRNPC-205ENST00000553300 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
HNRNPC-205ENST00000553300 PER1O15534 1290 aaPredicted RBP17.93■□□□□ 0.46
HNRNPC-205ENST00000553300 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
HNRNPC-205ENST00000553300 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
HNRNPC-205ENST00000553300 BTAF1O14981 1849 aa17.93■□□□□ 0.46
HNRNPC-205ENST00000553300 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
HNRNPC-205ENST00000553300 SYTL4Q96C24 671 aaPredicted RBP17.92■□□□□ 0.46
HNRNPC-205ENST00000553300 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
HNRNPC-205ENST00000553300 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
HNRNPC-205ENST00000553300 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
HNRNPC-205ENST00000553300 SLC15A2Q16348 729 aa17.9■□□□□ 0.46
HNRNPC-205ENST00000553300 IGSF1Q8N6C5 1336 aa17.89■□□□□ 0.45
HNRNPC-205ENST00000553300 CYP27B1O15528 508 aa17.89■□□□□ 0.45
HNRNPC-205ENST00000553300 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
HNRNPC-205ENST00000553300 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
HNRNPC-205ENST00000553300 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
HNRNPC-205ENST00000553300 DOT1LQ8TEK3 1739 aa17.88■□□□□ 0.45
HNRNPC-205ENST00000553300 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
HNRNPC-205ENST00000553300 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
HNRNPC-205ENST00000553300 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
HNRNPC-205ENST00000553300 LRRC4BQ9NT99 713 aa17.85■□□□□ 0.45
HNRNPC-205ENST00000553300 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
HNRNPC-205ENST00000553300 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
HNRNPC-205ENST00000553300 MTHFSP49914 203 aa17.83■□□□□ 0.45
HNRNPC-205ENST00000553300 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.45
HNRNPC-205ENST00000553300 PHKG2P15735 406 aa17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 IL13P35225 146 aa17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 LY75O60449 1722 aa17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 PAPPAQ13219 1627 aa17.82■□□□□ 0.44
HNRNPC-205ENST00000553300 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
HNRNPC-205ENST00000553300 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
HNRNPC-205ENST00000553300 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
HNRNPC-205ENST00000553300 AKT1S1Q96B36 256 aa17.8■□□□□ 0.44
HNRNPC-205ENST00000553300 KDRP35968 1356 aa17.8■□□□□ 0.44
HNRNPC-205ENST00000553300 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
HNRNPC-205ENST00000553300 ITGB4P16144 1822 aa17.79■□□□□ 0.44
HNRNPC-205ENST00000553300 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
HNRNPC-205ENST00000553300 TMOD3Q9NYL9 352 aa17.79■□□□□ 0.44
HNRNPC-205ENST00000553300 PPP1R1BQ9UD71 204 aaPredicted RBP17.79■□□□□ 0.44
HNRNPC-205ENST00000553300 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 ZNF827Q17R98 1081 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 SLC16A10Q8TF71 515 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 PIGBQ92521 554 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 PDGFDQ9GZP0 370 aaPredicted RBP17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
HNRNPC-205ENST00000553300 PALLDQ8WX93 1383 aa17.77■□□□□ 0.44
HNRNPC-205ENST00000553300 ZBTB7AO95365 584 aa17.77■□□□□ 0.43
HNRNPC-205ENST00000553300 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
HNRNPC-205ENST00000553300 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
HNRNPC-205ENST00000553300 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
HNRNPC-205ENST00000553300 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
HNRNPC-205ENST00000553300 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
HNRNPC-205ENST00000553300 KCNQ4P56696 695 aa17.75■□□□□ 0.43
HNRNPC-205ENST00000553300 ATF5Q9Y2D1 282 aaPredicted RBP17.74■□□□□ 0.43
HNRNPC-205ENST00000553300 PTGER2P43116 358 aa17.73■□□□□ 0.43
HNRNPC-205ENST00000553300 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
HNRNPC-205ENST00000553300 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
HNRNPC-205ENST00000553300 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
HNRNPC-205ENST00000553300 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
HNRNPC-205ENST00000553300 LOC102724428A0A0B4J2F2 783 aa17.71■□□□□ 0.43
HNRNPC-205ENST00000553300 SIK1P57059 783 aa17.71■□□□□ 0.43
HNRNPC-205ENST00000553300 C5P01031 1676 aa17.7■□□□□ 0.42
HNRNPC-205ENST00000553300 CABP4P57796 275 aa17.7■□□□□ 0.42
HNRNPC-205ENST00000553300 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
HNRNPC-205ENST00000553300 SGIP1Q9BQI5 828 aa17.7■□□□□ 0.42
HNRNPC-205ENST00000553300 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
HNRNPC-205ENST00000553300 HMOX1P09601 288 aa17.69■□□□□ 0.42
HNRNPC-205ENST00000553300 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
HNRNPC-205ENST00000553300 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
HNRNPC-205ENST00000553300 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 POLD1P28340 1107 aa17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 ATP6V1AP38606 617 aa17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 AK7Q96M32 723 aa17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
HNRNPC-205ENST00000553300 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
HNRNPC-205ENST00000553300 ARXQ96QS3 562 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms