RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 USHBP1Q8N6Y0 703 aa24.15■■□□□ 1.46
LRP1-204ENST00000553277 CRBNQ96SW2 442 aa24.15■■□□□ 1.46
LRP1-204ENST00000553277 HSPA1LP34931 641 aa24.15■■□□□ 1.46
LRP1-204ENST00000553277 MTHFSDQ2M296 383 aaKnown RBP24.13■■□□□ 1.45
LRP1-204ENST00000553277 GAS2L2Q8NHY3 880 aa24.13■■□□□ 1.45
LRP1-204ENST00000553277 NLRP2Q9NX02 1062 aa24.13■■□□□ 1.45
LRP1-204ENST00000553277 PLIN1O60240 522 aa24.12■■□□□ 1.45
LRP1-204ENST00000553277 LMOD3Q0VAK6 560 aa24.12■■□□□ 1.45
LRP1-204ENST00000553277 CARD10Q9BWT7 1032 aa24.12■■□□□ 1.45
LRP1-204ENST00000553277 IL16Q14005 1332 aa24.12■■□□□ 1.45
LRP1-204ENST00000553277 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
LRP1-204ENST00000553277 BTG4Q9NY30 223 aa24.11■■□□□ 1.45
LRP1-204ENST00000553277 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
LRP1-204ENST00000553277 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
LRP1-204ENST00000553277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.1■■□□□ 1.45
LRP1-204ENST00000553277 SLIT2O94813 1529 aa24.09■■□□□ 1.45
LRP1-204ENST00000553277 SPINK5Q9NQ38 1064 aaPredicted RBP24.09■■□□□ 1.45
LRP1-204ENST00000553277 NWD2Q9ULI1 1742 aa24.09■■□□□ 1.45
LRP1-204ENST00000553277 PLCH1Q4KWH8 1693 aa24.09■■□□□ 1.45
LRP1-204ENST00000553277 CRB1P82279 1406 aa24.08■■□□□ 1.45
LRP1-204ENST00000553277 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.44
LRP1-204ENST00000553277 ADAMTS2O95450 1211 aa24.07■■□□□ 1.44
LRP1-204ENST00000553277 EVA1CP58658 441 aa24.07■■□□□ 1.44
LRP1-204ENST00000553277 NRAPQ86VF7 1730 aa24.06■■□□□ 1.44
LRP1-204ENST00000553277 KDM2BQ8NHM5 1336 aa24.06■■□□□ 1.44
LRP1-204ENST00000553277 PLEKHO1Q53GL0 409 aaPredicted RBP24.06■■□□□ 1.44
LRP1-204ENST00000553277 TOM1L2Q6ZVM7 507 aa24.06■■□□□ 1.44
LRP1-204ENST00000553277 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
LRP1-204ENST00000553277 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
LRP1-204ENST00000553277 CALD1Q05682 793 aaKnown RBP24.05■■□□□ 1.44
LRP1-204ENST00000553277 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
LRP1-204ENST00000553277 RAPGEF4Q8WZA2 1011 aa24.05■■□□□ 1.44
LRP1-204ENST00000553277 MEGF6O75095 1541 aa24.05■■□□□ 1.44
LRP1-204ENST00000553277 CENPQQ7L2Z9 268 aaPredicted RBP24.05■■□□□ 1.44
LRP1-204ENST00000553277 LRP6O75581 1613 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 ANP32AP39687 249 aaKnown RBP24.03■■□□□ 1.44
LRP1-204ENST00000553277 C20orf194Q5TEA3 1177 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 ERICH6Q7L0X2 663 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 STRN4Q9NRL3 753 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
LRP1-204ENST00000553277 PKD1L3Q7Z443 1732 aa24.02■■□□□ 1.44
LRP1-204ENST00000553277 GNAT3A8MTJ3 354 aa24.02■■□□□ 1.44
LRP1-204ENST00000553277 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
LRP1-204ENST00000553277 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
LRP1-204ENST00000553277 ZNF853P0CG23 659 aa24.02■■□□□ 1.44
LRP1-204ENST00000553277 PDE3AQ14432 1141 aa24.02■■□□□ 1.44
LRP1-204ENST00000553277 MYH16Q9H6N6 1097 aa24.01■■□□□ 1.43
LRP1-204ENST00000553277 PARP4Q9UKK3 1724 aaKnown RBP24■■□□□ 1.43
LRP1-204ENST00000553277 AKAP4Q5JQC9 854 aa24■■□□□ 1.43
LRP1-204ENST00000553277 CEMIPQ8WUJ3 1361 aa24■■□□□ 1.43
LRP1-204ENST00000553277 AAMPQ13685 434 aa23.99■■□□□ 1.43
LRP1-204ENST00000553277 IFT57Q9NWB7 429 aa23.99■■□□□ 1.43
LRP1-204ENST00000553277 LRRC37A3O60309 1634 aa23.99■■□□□ 1.43
LRP1-204ENST00000553277 BACH2Q9BYV9 841 aa23.99■■□□□ 1.43
LRP1-204ENST00000553277 SPG7Q9UQ90 795 aa23.99■■□□□ 1.43
LRP1-204ENST00000553277 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 ADAMTS7Q9UKP4 1686 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 DISP2A7MBM2 1401 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 IL2RBP14784 551 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 PDE4AP27815 886 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 ZNF530Q6P9A1 599 aaPredicted RBP23.98■■□□□ 1.43
LRP1-204ENST00000553277 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
LRP1-204ENST00000553277 CFAP44Q96MT7 982 aa23.98■■□□□ 1.43
LRP1-204ENST00000553277 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
LRP1-204ENST00000553277 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
LRP1-204ENST00000553277 THUMPD2Q9BTF0 503 aaKnown RBP23.97■■□□□ 1.43
LRP1-204ENST00000553277 GNAI1P63096 354 aa23.96■■□□□ 1.43
LRP1-204ENST00000553277 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
LRP1-204ENST00000553277 MCM10Q7L590 875 aa23.96■■□□□ 1.43
LRP1-204ENST00000553277 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
LRP1-204ENST00000553277 THRAP3Q9Y2W1 955 aaKnown RBP23.96■■□□□ 1.43
LRP1-204ENST00000553277 NOP58Q9Y2X3 529 aaKnown RBP23.95■■□□□ 1.43
LRP1-204ENST00000553277 SPATA31A1Q5TZJ5 1347 aa23.95■■□□□ 1.42
LRP1-204ENST00000553277 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.95■■□□□ 1.42
LRP1-204ENST00000553277 SPATA31A5Q5VU36 1347 aa23.94■■□□□ 1.42
LRP1-204ENST00000553277 SPATA31A7Q8IWB4 1347 aa23.94■■□□□ 1.42
LRP1-204ENST00000553277 CHL1O00533 1208 aa23.94■■□□□ 1.42
LRP1-204ENST00000553277 NGLY1Q96IV0 654 aa23.94■■□□□ 1.42
LRP1-204ENST00000553277 C1orf141Q5JVX7 400 aa23.93■■□□□ 1.42
LRP1-204ENST00000553277 BABAM1Q9NWV8 329 aa23.93■■□□□ 1.42
LRP1-204ENST00000553277 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
LRP1-204ENST00000553277 PHKG2P15735 406 aa23.92■■□□□ 1.42
LRP1-204ENST00000553277 C8orf37Q96NL8 207 aa23.92■■□□□ 1.42
LRP1-204ENST00000553277 CYP27B1O15528 508 aa23.92■■□□□ 1.42
LRP1-204ENST00000553277 VPS72Q15906 364 aa23.92■■□□□ 1.42
LRP1-204ENST00000553277 ZCRB1Q8TBF4 217 aaKnown RBP23.92■■□□□ 1.42
LRP1-204ENST00000553277 CDCA7Q9BWT1 371 aaPredicted RBP23.92■■□□□ 1.42
LRP1-204ENST00000553277 WNK3Q9BYP7 1800 aa23.91■■□□□ 1.42
LRP1-204ENST00000553277 IFNL2Q8IZJ0 200 aa23.91■■□□□ 1.42
LRP1-204ENST00000553277 BCAR3O75815 825 aa23.9■■□□□ 1.42
LRP1-204ENST00000553277 BARGINQ6ZT62 677 aa23.9■■□□□ 1.42
LRP1-204ENST00000553277 SHANK3Q9BYB0 1731 aa23.9■■□□□ 1.42
LRP1-204ENST00000553277 NKX1-1Q15270 411 aaPredicted RBP23.89■■□□□ 1.42
LRP1-204ENST00000553277 MBIPQ9NS73 344 aa23.89■■□□□ 1.42
LRP1-204ENST00000553277 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
LRP1-204ENST00000553277 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
LRP1-204ENST00000553277 VIRMAQ69YN4 1812 aaKnown RBP23.89■■□□□ 1.41
LRP1-204ENST00000553277 RNMTO43148 476 aaKnown RBP23.89■■□□□ 1.41
LRP1-204ENST00000553277 FBXO41Q8TF61 875 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms