RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
MMP19-209ENST00000552872 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
MMP19-209ENST00000552872 FCHSD2O94868 740 aa13.29□□□□□ -0.28
MMP19-209ENST00000552872 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
MMP19-209ENST00000552872 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
MMP19-209ENST00000552872 RIPK4P57078 832 aa13.28□□□□□ -0.28
MMP19-209ENST00000552872 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.28
MMP19-209ENST00000552872 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.28
MMP19-209ENST00000552872 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
MMP19-209ENST00000552872 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
MMP19-209ENST00000552872 MCM10Q7L590 875 aa13.27□□□□□ -0.29
MMP19-209ENST00000552872 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.29
MMP19-209ENST00000552872 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
MMP19-209ENST00000552872 MEGF6O75095 1541 aa13.26□□□□□ -0.29
MMP19-209ENST00000552872 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
MMP19-209ENST00000552872 FBXO41Q8TF61 875 aa13.25□□□□□ -0.29
MMP19-209ENST00000552872 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
MMP19-209ENST00000552872 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
MMP19-209ENST00000552872 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
MMP19-209ENST00000552872 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
MMP19-209ENST00000552872 KDRP35968 1356 aa13.24□□□□□ -0.29
MMP19-209ENST00000552872 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
MMP19-209ENST00000552872 NEFMP07197 916 aa13.24□□□□□ -0.29
MMP19-209ENST00000552872 USP21Q9UK80 565 aa13.24□□□□□ -0.29
MMP19-209ENST00000552872 AFF2P51816 1311 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
MMP19-209ENST00000552872 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 A0A0G2JS52 829 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
MMP19-209ENST00000552872 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
MMP19-209ENST00000552872 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
MMP19-209ENST00000552872 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
MMP19-209ENST00000552872 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
MMP19-209ENST00000552872 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
MMP19-209ENST00000552872 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
MMP19-209ENST00000552872 CRB1P82279 1406 aa13.21□□□□□ -0.29
MMP19-209ENST00000552872 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
MMP19-209ENST00000552872 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
MMP19-209ENST00000552872 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
MMP19-209ENST00000552872 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
MMP19-209ENST00000552872 SLIT2O94813 1529 aa13.21□□□□□ -0.29
MMP19-209ENST00000552872 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.3
MMP19-209ENST00000552872 CARD10Q9BWT7 1032 aa13.21□□□□□ -0.3
MMP19-209ENST00000552872 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
MMP19-209ENST00000552872 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
MMP19-209ENST00000552872 IL2RBP14784 551 aa13.18□□□□□ -0.3
MMP19-209ENST00000552872 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
MMP19-209ENST00000552872 CYP27B1O15528 508 aa13.18□□□□□ -0.3
MMP19-209ENST00000552872 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
MMP19-209ENST00000552872 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
MMP19-209ENST00000552872 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 ABCC6O95255 1503 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
MMP19-209ENST00000552872 VIRMAQ69YN4 1812 aaKnown RBP13.17□□□□□ -0.3
MMP19-209ENST00000552872 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 NWD2Q9ULI1 1742 aa13.17□□□□□ -0.3
MMP19-209ENST00000552872 GNAT3A8MTJ3 354 aa13.16□□□□□ -0.3
MMP19-209ENST00000552872 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
MMP19-209ENST00000552872 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
MMP19-209ENST00000552872 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
MMP19-209ENST00000552872 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
MMP19-209ENST00000552872 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
MMP19-209ENST00000552872 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
MMP19-209ENST00000552872 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
MMP19-209ENST00000552872 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
MMP19-209ENST00000552872 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
MMP19-209ENST00000552872 SHANK3Q9BYB0 1731 aa13.15□□□□□ -0.3
MMP19-209ENST00000552872 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
MMP19-209ENST00000552872 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
MMP19-209ENST00000552872 PHKG2P15735 406 aa13.14□□□□□ -0.31
MMP19-209ENST00000552872 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
MMP19-209ENST00000552872 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 PDE4CQ08493 712 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 VPS72Q15906 364 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
MMP19-209ENST00000552872 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
MMP19-209ENST00000552872 KCNQ3O43525 872 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
MMP19-209ENST00000552872 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
MMP19-209ENST00000552872 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
MMP19-209ENST00000552872 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
MMP19-209ENST00000552872 GLI3P10071 1580 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
MMP19-209ENST00000552872 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 DDB1Q16531 1140 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
MMP19-209ENST00000552872 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
MMP19-209ENST00000552872 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
MMP19-209ENST00000552872 EXOC5O00471 708 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms