RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
RFX4-210ENST00000552773 SETD1BQ9UPS6 1966 aaKnown RBP13□□□□□ -0.33
RFX4-210ENST00000552773 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
RFX4-210ENST00000552773 TSPYL6Q8N831 410 aa13□□□□□ -0.33
RFX4-210ENST00000552773 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
RFX4-210ENST00000552773 PEAK1Q9H792 1746 aa13□□□□□ -0.33
RFX4-210ENST00000552773 CRB1P82279 1406 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 DEKP35659 375 aaKnown RBP12.99□□□□□ -0.33
RFX4-210ENST00000552773 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
RFX4-210ENST00000552773 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
RFX4-210ENST00000552773 ANKRD45Q5TZF3 282 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
RFX4-210ENST00000552773 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
RFX4-210ENST00000552773 USP19O94966 1318 aa12.98□□□□□ -0.33
RFX4-210ENST00000552773 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
RFX4-210ENST00000552773 HOXC9P31274 260 aa12.98□□□□□ -0.33
RFX4-210ENST00000552773 EYA1Q99502 592 aa12.98□□□□□ -0.33
RFX4-210ENST00000552773 ADRA2BP18089 450 aa12.97□□□□□ -0.33
RFX4-210ENST00000552773 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
RFX4-210ENST00000552773 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
RFX4-210ENST00000552773 PSME1Q06323 249 aa12.96□□□□□ -0.33
RFX4-210ENST00000552773 MCM10Q7L590 875 aa12.96□□□□□ -0.33
RFX4-210ENST00000552773 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
RFX4-210ENST00000552773 DCTPP1Q9H773 170 aa12.96□□□□□ -0.33
RFX4-210ENST00000552773 GNAI3P08754 354 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 HOXB7P09629 217 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 DCTN1Q14203 1278 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 HSCBQ8IWL3 235 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 IL27Q8NEV9 243 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 IP6K1Q92551 441 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 LNPKQ9C0E8 428 aa12.96□□□□□ -0.34
RFX4-210ENST00000552773 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
RFX4-210ENST00000552773 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
RFX4-210ENST00000552773 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
RFX4-210ENST00000552773 NFKBIBQ15653 356 aa12.95□□□□□ -0.34
RFX4-210ENST00000552773 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
RFX4-210ENST00000552773 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
RFX4-210ENST00000552773 SOX12O15370 315 aa12.94□□□□□ -0.34
RFX4-210ENST00000552773 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
RFX4-210ENST00000552773 ADAMTSL3P82987 1691 aa12.94□□□□□ -0.34
RFX4-210ENST00000552773 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
RFX4-210ENST00000552773 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 CDC45O75419 566 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
RFX4-210ENST00000552773 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
RFX4-210ENST00000552773 SEC24BO95487 1268 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 PTMSP20962 102 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 SNX21Q969T3 373 aa12.93□□□□□ -0.34
RFX4-210ENST00000552773 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
RFX4-210ENST00000552773 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
RFX4-210ENST00000552773 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
RFX4-210ENST00000552773 MSH6P52701 1360 aa12.92□□□□□ -0.34
RFX4-210ENST00000552773 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
RFX4-210ENST00000552773 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
RFX4-210ENST00000552773 GNAI2P04899 355 aa12.91□□□□□ -0.34
RFX4-210ENST00000552773 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
RFX4-210ENST00000552773 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
RFX4-210ENST00000552773 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
RFX4-210ENST00000552773 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
RFX4-210ENST00000552773 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
RFX4-210ENST00000552773 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 GSE1Q14687 1217 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
RFX4-210ENST00000552773 SRCIN1Q9C0H9 1055 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 RGS12O14924 1447 aa12.89□□□□□ -0.35
RFX4-210ENST00000552773 AKAP4Q5JQC9 854 aa12.88□□□□□ -0.35
RFX4-210ENST00000552773 SIRT2Q8IXJ6 389 aa12.88□□□□□ -0.35
RFX4-210ENST00000552773 C1orf115Q9H7X2 142 aa12.88□□□□□ -0.35
RFX4-210ENST00000552773 LMTK3Q96Q04 1460 aa12.88□□□□□ -0.35
RFX4-210ENST00000552773 MST1RQ04912 1400 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 REC8O95072 547 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 FLIIQ13045 1269 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
RFX4-210ENST00000552773 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 NFAT5O94916 1531 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
RFX4-210ENST00000552773 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
RFX4-210ENST00000552773 TEFQ10587 303 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 LTN1O94822 1766 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 SLIT3O75094 1523 aa12.86□□□□□ -0.35
RFX4-210ENST00000552773 DCCP43146 1447 aa12.85□□□□□ -0.35
RFX4-210ENST00000552773 FOXO3O43524 673 aa12.85□□□□□ -0.35
RFX4-210ENST00000552773 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
RFX4-210ENST00000552773 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
RFX4-210ENST00000552773 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms