RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 SHANK3Q9BYB0 1731 aa19.13■□□□□ 0.65
LETMD1-235ENST00000552739 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
LETMD1-235ENST00000552739 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
LETMD1-235ENST00000552739 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
LETMD1-235ENST00000552739 AMER1Q5JTC6 1135 aaPredicted RBP19.11■□□□□ 0.65
LETMD1-235ENST00000552739 IL2RBP14784 551 aa19.1■□□□□ 0.65
LETMD1-235ENST00000552739 BCL9O00512 1426 aa19.09■□□□□ 0.65
LETMD1-235ENST00000552739 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
LETMD1-235ENST00000552739 POLKQ9UBT6 870 aa19.09■□□□□ 0.65
LETMD1-235ENST00000552739 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.65
LETMD1-235ENST00000552739 SF3B2Q13435 895 aaKnown RBP19.08■□□□□ 0.65
LETMD1-235ENST00000552739 MEGF6O75095 1541 aa19.08■□□□□ 0.65
LETMD1-235ENST00000552739 NCAPD2Q15021 1401 aa19.08■□□□□ 0.64
LETMD1-235ENST00000552739 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
LETMD1-235ENST00000552739 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
LETMD1-235ENST00000552739 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
LETMD1-235ENST00000552739 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
LETMD1-235ENST00000552739 MARCH10Q8NA82 808 aaPredicted RBP19.07■□□□□ 0.64
LETMD1-235ENST00000552739 EXOC5O00471 708 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
LETMD1-235ENST00000552739 NBPF6Q5VWK0 638 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 NBPF4Q96M43 638 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 RREB1Q92766 1687 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
LETMD1-235ENST00000552739 TRIM37O94972 964 aa19.05■□□□□ 0.64
LETMD1-235ENST00000552739 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
LETMD1-235ENST00000552739 BAG6P46379 1132 aa19.03■□□□□ 0.64
LETMD1-235ENST00000552739 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
LETMD1-235ENST00000552739 USHBP1Q8N6Y0 703 aa19.03■□□□□ 0.64
LETMD1-235ENST00000552739 CCDC136Q96JN2 1154 aa19.03■□□□□ 0.64
LETMD1-235ENST00000552739 DOT1LQ8TEK3 1739 aa19.02■□□□□ 0.64
LETMD1-235ENST00000552739 NUP188Q5SRE5 1749 aa19.01■□□□□ 0.63
LETMD1-235ENST00000552739 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
LETMD1-235ENST00000552739 EIF4A2Q14240 407 aaKnown RBP19■□□□□ 0.63
LETMD1-235ENST00000552739 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
LETMD1-235ENST00000552739 BTAF1O14981 1849 aa18.99■□□□□ 0.63
LETMD1-235ENST00000552739 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
LETMD1-235ENST00000552739 APBA3O96018 575 aa18.97■□□□□ 0.63
LETMD1-235ENST00000552739 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
LETMD1-235ENST00000552739 EYA1Q99502 592 aa18.97■□□□□ 0.63
LETMD1-235ENST00000552739 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
LETMD1-235ENST00000552739 TATP17735 454 aaPredicted RBP18.96■□□□□ 0.63
LETMD1-235ENST00000552739 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
LETMD1-235ENST00000552739 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
LETMD1-235ENST00000552739 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
LETMD1-235ENST00000552739 PTF1AQ7RTS3 328 aa18.94■□□□□ 0.62
LETMD1-235ENST00000552739 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
LETMD1-235ENST00000552739 PLEKHG2Q9H7P9 1386 aa18.94■□□□□ 0.62
LETMD1-235ENST00000552739 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
LETMD1-235ENST00000552739 EZH2Q15910 746 aaKnown RBP18.94■□□□□ 0.62
LETMD1-235ENST00000552739 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
LETMD1-235ENST00000552739 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-235ENST00000552739 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
LETMD1-235ENST00000552739 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
LETMD1-235ENST00000552739 MTHFSP49914 203 aa18.91■□□□□ 0.62
LETMD1-235ENST00000552739 KCNQ2O43526 872 aa18.91■□□□□ 0.62
LETMD1-235ENST00000552739 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
LETMD1-235ENST00000552739 TCERG1O14776 1098 aaKnown RBP18.9■□□□□ 0.62
LETMD1-235ENST00000552739 PLSCR1O15162 318 aa18.9■□□□□ 0.62
LETMD1-235ENST00000552739 IL13P35225 146 aa18.9■□□□□ 0.62
LETMD1-235ENST00000552739 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-235ENST00000552739 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
LETMD1-235ENST00000552739 ITGB4P16144 1822 aa18.9■□□□□ 0.62
LETMD1-235ENST00000552739 KAT6BQ8WYB5 2073 aa18.9■□□□□ 0.62
LETMD1-235ENST00000552739 KDRP35968 1356 aa18.89■□□□□ 0.61
LETMD1-235ENST00000552739 MS4A1P11836 297 aa18.88■□□□□ 0.61
LETMD1-235ENST00000552739 LY75O60449 1722 aa18.88■□□□□ 0.61
LETMD1-235ENST00000552739 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
LETMD1-235ENST00000552739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.61
LETMD1-235ENST00000552739 CYP27B1O15528 508 aa18.87■□□□□ 0.61
LETMD1-235ENST00000552739 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
LETMD1-235ENST00000552739 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
LETMD1-235ENST00000552739 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
LETMD1-235ENST00000552739 IPO9Q96P70 1041 aaKnown RBP18.85■□□□□ 0.61
LETMD1-235ENST00000552739 DIAPH1O60610 1272 aaKnown RBP18.83■□□□□ 0.61
LETMD1-235ENST00000552739 PPP2R1AP30153 589 aa18.83■□□□□ 0.6
LETMD1-235ENST00000552739 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.6
LETMD1-235ENST00000552739 SULT6B1Q6IMI4 303 aa18.83■□□□□ 0.6
LETMD1-235ENST00000552739 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
LETMD1-235ENST00000552739 PROM2Q8N271 834 aa18.82■□□□□ 0.6
LETMD1-235ENST00000552739 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
LETMD1-235ENST00000552739 SYTL4Q96C24 671 aaPredicted RBP18.81■□□□□ 0.6
LETMD1-235ENST00000552739 PHKG2P15735 406 aa18.8■□□□□ 0.6
LETMD1-235ENST00000552739 TXNRD1Q16881 649 aa18.8■□□□□ 0.6
LETMD1-235ENST00000552739 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
LETMD1-235ENST00000552739 LRP5O75197 1615 aa18.8■□□□□ 0.6
LETMD1-235ENST00000552739 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
LETMD1-235ENST00000552739 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
LETMD1-235ENST00000552739 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-235ENST00000552739 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
LETMD1-235ENST00000552739 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
LETMD1-235ENST00000552739 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
LETMD1-235ENST00000552739 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-235ENST00000552739 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
LETMD1-235ENST00000552739 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
LETMD1-235ENST00000552739 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
LETMD1-235ENST00000552739 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
LETMD1-235ENST00000552739 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
LETMD1-235ENST00000552739 C5P01031 1676 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms