RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 IGSF1Q8N6C5 1336 aa24.95■■□□□ 1.58
PRPF40B-216ENST00000552301 PCDH11XQ9BZA7 1347 aa24.94■■□□□ 1.58
PRPF40B-216ENST00000552301 PCDH11YQ9BZA8 1340 aa24.94■■□□□ 1.58
PRPF40B-216ENST00000552301 KAT6BQ8WYB5 2073 aa24.94■■□□□ 1.58
PRPF40B-216ENST00000552301 EN1Q05925 392 aaPredicted RBP24.93■■□□□ 1.58
PRPF40B-216ENST00000552301 BCL11BQ9C0K0 894 aaPredicted RBP24.93■■□□□ 1.58
PRPF40B-216ENST00000552301 ACSBG1Q96GR2 724 aa24.92■■□□□ 1.58
PRPF40B-216ENST00000552301 SHANK3Q9BYB0 1731 aa24.92■■□□□ 1.58
PRPF40B-216ENST00000552301 DIAPH1O60610 1272 aaKnown RBP24.91■■□□□ 1.58
PRPF40B-216ENST00000552301 IL13P35225 146 aa24.91■■□□□ 1.58
PRPF40B-216ENST00000552301 CFAP53Q96M91 514 aa24.91■■□□□ 1.58
PRPF40B-216ENST00000552301 SPG7Q9UQ90 795 aa24.91■■□□□ 1.58
PRPF40B-216ENST00000552301 NHSQ6T4R5 1651 aa24.9■■□□□ 1.58
PRPF40B-216ENST00000552301 PARD3Q8TEW0 1356 aa24.9■■□□□ 1.58
PRPF40B-216ENST00000552301 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.58
PRPF40B-216ENST00000552301 PPP2R1AP30153 589 aa24.88■■□□□ 1.57
PRPF40B-216ENST00000552301 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
PRPF40B-216ENST00000552301 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
PRPF40B-216ENST00000552301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.87■■□□□ 1.57
PRPF40B-216ENST00000552301 EZH2Q15910 746 aaKnown RBP24.86■■□□□ 1.57
PRPF40B-216ENST00000552301 AEBP1Q8IUX7 1158 aa24.86■■□□□ 1.57
PRPF40B-216ENST00000552301 SYTL4Q96C24 671 aaPredicted RBP24.86■■□□□ 1.57
PRPF40B-216ENST00000552301 KCNQ2O43526 872 aa24.85■■□□□ 1.57
PRPF40B-216ENST00000552301 PTF1AQ7RTS3 328 aa24.85■■□□□ 1.57
PRPF40B-216ENST00000552301 CAMKK2Q96RR4 588 aa24.85■■□□□ 1.57
PRPF40B-216ENST00000552301 DOT1LQ8TEK3 1739 aa24.85■■□□□ 1.57
PRPF40B-216ENST00000552301 COL3A1P02461 1466 aaPredicted RBP24.84■■□□□ 1.57
PRPF40B-216ENST00000552301 KDRP35968 1356 aa24.83■■□□□ 1.57
PRPF40B-216ENST00000552301 CYP27B1O15528 508 aa24.83■■□□□ 1.57
PRPF40B-216ENST00000552301 PLEKHO1Q53GL0 409 aaPredicted RBP24.83■■□□□ 1.57
PRPF40B-216ENST00000552301 U2SURPO15042 1029 aaKnown RBP24.82■■□□□ 1.56
PRPF40B-216ENST00000552301 RGPD3A6NKT7 1758 aaPredicted RBP24.82■■□□□ 1.56
PRPF40B-216ENST00000552301 RGPD4Q7Z3J3 1758 aa24.82■■□□□ 1.56
PRPF40B-216ENST00000552301 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
PRPF40B-216ENST00000552301 PLSCR1O15162 318 aa24.81■■□□□ 1.56
PRPF40B-216ENST00000552301 HMOX1P09601 288 aa24.81■■□□□ 1.56
PRPF40B-216ENST00000552301 RALBP1Q15311 655 aa24.81■■□□□ 1.56
PRPF40B-216ENST00000552301 AMOTQ4VCS5 1084 aa24.81■■□□□ 1.56
PRPF40B-216ENST00000552301 BTAF1O14981 1849 aa24.8■■□□□ 1.56
PRPF40B-216ENST00000552301 PRIM1P49642 420 aaKnown RBP24.8■■□□□ 1.56
PRPF40B-216ENST00000552301 IFNL2Q8IZJ0 200 aa24.8■■□□□ 1.56
PRPF40B-216ENST00000552301 NUDCQ9Y266 331 aa24.8■■□□□ 1.56
PRPF40B-216ENST00000552301 RREB1Q92766 1687 aa24.78■■□□□ 1.56
PRPF40B-216ENST00000552301 ZNF530Q6P9A1 599 aaPredicted RBP24.78■■□□□ 1.56
PRPF40B-216ENST00000552301 PHKG2P15735 406 aa24.77■■□□□ 1.56
PRPF40B-216ENST00000552301 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
PRPF40B-216ENST00000552301 HSP90AB1P08238 724 aaKnown RBP24.76■■□□□ 1.55
PRPF40B-216ENST00000552301 C1orf141Q5JVX7 400 aa24.76■■□□□ 1.55
PRPF40B-216ENST00000552301 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
PRPF40B-216ENST00000552301 NUP188Q5SRE5 1749 aa24.75■■□□□ 1.55
PRPF40B-216ENST00000552301 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
PRPF40B-216ENST00000552301 TXNRD1Q16881 649 aa24.73■■□□□ 1.55
PRPF40B-216ENST00000552301 TOGARAM1Q9Y4F4 1720 aa24.72■■□□□ 1.55
PRPF40B-216ENST00000552301 MPRIPQ6WCQ1 1025 aa24.72■■□□□ 1.55
PRPF40B-216ENST00000552301 U2AF1L5P0DN76 240 aaPredicted RBP24.71■■□□□ 1.55
PRPF40B-216ENST00000552301 U2AF1Q01081 240 aaKnown RBP eCLIP24.71■■□□□ 1.55
PRPF40B-216ENST00000552301 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
PRPF40B-216ENST00000552301 TMOD3Q9NYL9 352 aa24.7■■□□□ 1.54
PRPF40B-216ENST00000552301 DCAF5Q96JK2 942 aa24.69■■□□□ 1.54
PRPF40B-216ENST00000552301 ITGB4P16144 1822 aa24.68■■□□□ 1.54
PRPF40B-216ENST00000552301 PSDA5PKW4 1024 aaPredicted RBP24.68■■□□□ 1.54
PRPF40B-216ENST00000552301 R3HDM1Q15032 1099 aaKnown RBP24.67■■□□□ 1.54
PRPF40B-216ENST00000552301 PROM2Q8N271 834 aa24.67■■□□□ 1.54
PRPF40B-216ENST00000552301 PRKAR2BP31323 418 aa24.66■■□□□ 1.54
PRPF40B-216ENST00000552301 AKAP4Q5JQC9 854 aa24.66■■□□□ 1.54
PRPF40B-216ENST00000552301 SLC27A3Q5K4L6 730 aa24.65■■□□□ 1.54
PRPF40B-216ENST00000552301 SMARCC1Q92922 1105 aaPredicted RBP24.65■■□□□ 1.54
PRPF40B-216ENST00000552301 KDM6AO15550 1401 aaPredicted RBP24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 ERVV-2B6SEH9 535 aa24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 MTHFSDQ2M296 383 aaKnown RBP24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 GAS2L2Q8NHY3 880 aa24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 PIGBQ92521 554 aa24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 RSPH6AQ9H0K4 717 aa24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
PRPF40B-216ENST00000552301 PALLDQ8WX93 1383 aa24.64■■□□□ 1.53
PRPF40B-216ENST00000552301 NEFMP07197 916 aa24.63■■□□□ 1.53
PRPF40B-216ENST00000552301 CABP4P57796 275 aa24.63■■□□□ 1.53
PRPF40B-216ENST00000552301 STK32BQ9NY57 414 aa24.63■■□□□ 1.53
PRPF40B-216ENST00000552301 FCHSD2O94868 740 aa24.62■■□□□ 1.53
PRPF40B-216ENST00000552301 CCNL1Q9UK58 526 aaPredicted RBP24.62■■□□□ 1.53
PRPF40B-216ENST00000552301 LY75O60449 1722 aa24.61■■□□□ 1.53
PRPF40B-216ENST00000552301 ANO8Q9HCE9 1232 aaPredicted RBP24.61■■□□□ 1.53
PRPF40B-216ENST00000552301 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
PRPF40B-216ENST00000552301 MAP3K5Q99683 1374 aa24.58■■□□□ 1.53
PRPF40B-216ENST00000552301 HMGB2P26583 209 aaKnown RBP24.58■■□□□ 1.53
PRPF40B-216ENST00000552301 LRRC4BQ9NT99 713 aa24.58■■□□□ 1.53
PRPF40B-216ENST00000552301 PNNQ9H307 717 aaKnown RBP24.57■■□□□ 1.52
PRPF40B-216ENST00000552301 PAPPAQ13219 1627 aa24.57■■□□□ 1.52
PRPF40B-216ENST00000552301 KCNQ4P56696 695 aa24.56■■□□□ 1.52
PRPF40B-216ENST00000552301 SLC15A2Q16348 729 aa24.56■■□□□ 1.52
PRPF40B-216ENST00000552301 GNAT3A8MTJ3 354 aa24.55■■□□□ 1.52
PRPF40B-216ENST00000552301 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
PRPF40B-216ENST00000552301 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
PRPF40B-216ENST00000552301 ASAP1Q9ULH1 1129 aa24.55■■□□□ 1.52
PRPF40B-216ENST00000552301 MAPK8IP3Q9UPT6 1336 aa24.54■■□□□ 1.52
PRPF40B-216ENST00000552301 ANP32CO43423 234 aa24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 NFATC2IPQ8NCF5 419 aa24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 SLC52A2Q9HAB3 445 aa24.53■■□□□ 1.52
PRPF40B-216ENST00000552301 LGR6Q9HBX8 967 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms