RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
RAB3IP-216ENST00000552199 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
RAB3IP-216ENST00000552199 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
RAB3IP-216ENST00000552199 IP6K1Q92551 441 aa17.77■□□□□ 0.44
RAB3IP-216ENST00000552199 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
RAB3IP-216ENST00000552199 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
RAB3IP-216ENST00000552199 ORAI2Q96SN7 254 aa17.76■□□□□ 0.43
RAB3IP-216ENST00000552199 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
RAB3IP-216ENST00000552199 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
RAB3IP-216ENST00000552199 MYT1Q01538 1121 aa17.75■□□□□ 0.43
RAB3IP-216ENST00000552199 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
RAB3IP-216ENST00000552199 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
RAB3IP-216ENST00000552199 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
RAB3IP-216ENST00000552199 DDRGK1Q96HY6 314 aa17.73■□□□□ 0.43
RAB3IP-216ENST00000552199 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
RAB3IP-216ENST00000552199 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
RAB3IP-216ENST00000552199 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
RAB3IP-216ENST00000552199 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
RAB3IP-216ENST00000552199 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
RAB3IP-216ENST00000552199 KIF1AQ12756 1690 aa17.71■□□□□ 0.43
RAB3IP-216ENST00000552199 SLIT3O75094 1523 aa17.7■□□□□ 0.42
RAB3IP-216ENST00000552199 C1orf167Q5SNV9 1468 aa17.7■□□□□ 0.42
RAB3IP-216ENST00000552199 TRPM3Q9HCF6 1732 aaPredicted RBP17.7■□□□□ 0.42
RAB3IP-216ENST00000552199 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
RAB3IP-216ENST00000552199 XPCQ01831 940 aaPredicted RBP17.7■□□□□ 0.42
RAB3IP-216ENST00000552199 MSH6P52701 1360 aa17.69■□□□□ 0.42
RAB3IP-216ENST00000552199 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
RAB3IP-216ENST00000552199 USHBP1Q8N6Y0 703 aa17.69■□□□□ 0.42
RAB3IP-216ENST00000552199 PTPRCP08575 1304 aa17.69■□□□□ 0.42
RAB3IP-216ENST00000552199 GCP02774 474 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 KRT28Q7Z3Y7 464 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 RGS12O14924 1447 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
RAB3IP-216ENST00000552199 NUCB1Q02818 461 aa17.67■□□□□ 0.42
RAB3IP-216ENST00000552199 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
RAB3IP-216ENST00000552199 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
RAB3IP-216ENST00000552199 USP19O94966 1318 aa17.67■□□□□ 0.42
RAB3IP-216ENST00000552199 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
RAB3IP-216ENST00000552199 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
RAB3IP-216ENST00000552199 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
RAB3IP-216ENST00000552199 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
RAB3IP-216ENST00000552199 SEC24BO95487 1268 aa17.66■□□□□ 0.42
RAB3IP-216ENST00000552199 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
RAB3IP-216ENST00000552199 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
RAB3IP-216ENST00000552199 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
RAB3IP-216ENST00000552199 MST1RQ04912 1400 aa17.65■□□□□ 0.42
RAB3IP-216ENST00000552199 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.42
RAB3IP-216ENST00000552199 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.42
RAB3IP-216ENST00000552199 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
RAB3IP-216ENST00000552199 TMEM94Q12767 1356 aa17.64■□□□□ 0.41
RAB3IP-216ENST00000552199 ATF3P18847 181 aa17.63■□□□□ 0.41
RAB3IP-216ENST00000552199 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
RAB3IP-216ENST00000552199 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
RAB3IP-216ENST00000552199 DCCP43146 1447 aa17.62■□□□□ 0.41
RAB3IP-216ENST00000552199 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
RAB3IP-216ENST00000552199 NCAPD2Q15021 1401 aa17.62■□□□□ 0.41
RAB3IP-216ENST00000552199 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
RAB3IP-216ENST00000552199 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
RAB3IP-216ENST00000552199 G2E3Q7L622 706 aa17.61■□□□□ 0.41
RAB3IP-216ENST00000552199 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
RAB3IP-216ENST00000552199 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 ANKRD24Q8TF21 1146 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
RAB3IP-216ENST00000552199 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
RAB3IP-216ENST00000552199 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
RAB3IP-216ENST00000552199 CAMTA1Q9Y6Y1 1673 aa17.59■□□□□ 0.41
RAB3IP-216ENST00000552199 AMOTQ4VCS5 1084 aa17.58■□□□□ 0.4
RAB3IP-216ENST00000552199 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
RAB3IP-216ENST00000552199 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
RAB3IP-216ENST00000552199 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.4
RAB3IP-216ENST00000552199 LGR6Q9HBX8 967 aa17.58■□□□□ 0.4
RAB3IP-216ENST00000552199 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 HSPA2P54652 639 aa17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 CADPS2Q86UW7 1296 aa17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 RGPD5Q99666 1765 aa17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
RAB3IP-216ENST00000552199 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
RAB3IP-216ENST00000552199 F6X3S4 739 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 MEIS3Q99687 375 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 FLIIQ13045 1269 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
RAB3IP-216ENST00000552199 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-216ENST00000552199 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
RAB3IP-216ENST00000552199 NECTIN2Q92692 538 aa17.53■□□□□ 0.4
RAB3IP-216ENST00000552199 NPHP3Q7Z494 1330 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms