RNA–Protein interactions for RNA: ENST00000552123.1

NPIPB12-208, Transcript of nuclear pore complex interacting protein family, member B12, human

TSL 4

Gene NPIPB12, Length 464 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB12-208	ENST00000552123	MFRP	Q9BY79	579 aa		9.2	□□□□□ -0.94
NPIPB12-208	ENST00000552123	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.2	□□□□□ -0.94
NPIPB12-208	ENST00000552123	SHANK3	Q9BYB0	1731 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	PPP2R1A	P30153	589 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	WAPL	Q7Z5K2	1190 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	JMY	Q8N9B5	988 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	TERF2IP	Q9NYB0	399 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	CGNL1	Q0VF96	1302 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	CPSF1	Q10570	1443 aa	Known RBP	9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	CDC42BPG	Q6DT37	1551 aa		9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123	COL22A1	Q8NFW1	1626 aa	Predicted RBP	9.19	□□□□□ -0.94
NPIPB12-208	ENST00000552123		A0A1W2PP64	1363 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	MST1R	Q04912	1400 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	TOPAZ1	Q8N9V7	1692 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	FBXO22	Q8NEZ5	403 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	TMC1	Q8TDI8	760 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	NSD3	Q9BZ95	1437 aa		9.18	□□□□□ -0.94
NPIPB12-208	ENST00000552123	ANKRD26	Q9UPS8	1709 aa		9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	MARF1	Q9Y4F3	1742 aa	Known RBP	9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	POLR3A	O14802	1390 aa	Predicted RBP	9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	SOS2	Q07890	1332 aa	Predicted RBP	9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	ZBED9	Q6R2W3	1325 aa		9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	SRPK2	P78362	688 aa	Known RBP	9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	VPS72	Q15906	364 aa		9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	GPR162	Q16538	588 aa		9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	CC2D1B	Q5T0F9	858 aa	Known RBP	9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	AMOTL2	Q9Y2J4	779 aa		9.17	□□□□□ -0.94
NPIPB12-208	ENST00000552123	NRK	Q7Z2Y5	1582 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	SLIT2	O94813	1529 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	PLEKHG3	A1L390	1219 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	POTEB2	H3BUK9	544 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	DPY19L2	Q6NUT2	758 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	SCUBE2	Q9NQ36	999 aa		9.16	□□□□□ -0.94
NPIPB12-208	ENST00000552123	ANKAR	Q7Z5J8	1434 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	AKAP12	Q02952	1782 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	MON2	Q7Z3U7	1717 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123		A0A0G2JS52	829 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	NKX1-1	Q15270	411 aa	Predicted RBP	9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	MS4A4A	Q96JQ5	239 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	BOLA1	Q9Y3E2	137 aa		9.15	□□□□□ -0.94
NPIPB12-208	ENST00000552123	EDC4	Q6P2E9	1401 aa	Known RBP	9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	TNS1	Q9HBL0	1735 aa	Known RBP	9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	MAP3K5	Q99683	1374 aa		9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	NUDT16	Q96DE0	195 aa	Known RBP	9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	KLRG1	Q96E93	195 aa		9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	CABP1	Q9NZU7	370 aa		9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	PPIP5K1	Q6PFW1	1433 aa		9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	SSH2	Q76I76	1423 aa		9.14	□□□□□ -0.95
NPIPB12-208	ENST00000552123	RREB1	Q92766	1687 aa		9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	PRR36	Q9H6K5	1346 aa		9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	APBA3	O96018	575 aa		9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	HNRNPU	Q00839	825 aa	Known RBP eCLIP	9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	FAM161A	Q3B820	660 aa		9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	CCDC9	Q9Y3X0	531 aa	Known RBP	9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	TNS2	Q63HR2	1409 aa		9.13	□□□□□ -0.95
NPIPB12-208	ENST00000552123	ITSN1	Q15811	1721 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	FYB1	O15117	783 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	MORC1	Q86VD1	984 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	FAM9B	Q8IZU0	186 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	NGEF	Q8N5V2	710 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	DDX17	Q92841	729 aa	Known RBP	9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	ATP10D	Q9P241	1426 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	KIF20B	Q96Q89	1820 aa		9.12	□□□□□ -0.95
NPIPB12-208	ENST00000552123	FMN2	Q9NZ56	1722 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	GTPBP6	O43824	516 aa	Predicted RBP	9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	GRIN3B	O60391	1043 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	POTEJ	P0CG39	1038 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	FAM196A	Q6ZSG2	479 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	C3orf67	Q6ZVT6	689 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	SPRYD3	Q8NCJ5	442 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	NUP188	Q5SRE5	1749 aa		9.11	□□□□□ -0.95
NPIPB12-208	ENST00000552123	PTGER2	P43116	358 aa		9.1	□□□□□ -0.95
NPIPB12-208	ENST00000552123	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.1	□□□□□ -0.95
NPIPB12-208	ENST00000552123	SMG6	Q86US8	1419 aa	Known RBP	9.1	□□□□□ -0.95
NPIPB12-208	ENST00000552123	ADGRL3	Q9HAR2	1447 aa		9.1	□□□□□ -0.95
NPIPB12-208	ENST00000552123	MLLT1	Q03111	559 aa	Predicted RBP	9.09	□□□□□ -0.95
NPIPB12-208	ENST00000552123	PDE3B	Q13370	1112 aa		9.09	□□□□□ -0.95
NPIPB12-208	ENST00000552123	USP54	Q70EL1	1684 aa		9.09	□□□□□ -0.95
NPIPB12-208	ENST00000552123	COL3A1	P02461	1466 aa	Predicted RBP	9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	NALCN	Q8IZF0	1738 aa		9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	USP6	P35125	1406 aa		9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	MICALL2	Q8IY33	904 aa		9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	ADAMTS8	Q9UP79	889 aa		9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	USP31	Q70CQ4	1352 aa		9.08	□□□□□ -0.96
NPIPB12-208	ENST00000552123	TRIM37	O94972	964 aa		9.07	□□□□□ -0.96
NPIPB12-208	ENST00000552123	OTUD5	Q96G74	571 aa		9.07	□□□□□ -0.96
NPIPB12-208	ENST00000552123	TTC21A	Q8NDW8	1320 aa		9.06	□□□□□ -0.96
NPIPB12-208	ENST00000552123	ZNF521	Q96K83	1311 aa		9.06	□□□□□ -0.96
NPIPB12-208	ENST00000552123	MTHFS	P49914	203 aa		9.06	□□□□□ -0.96
NPIPB12-208	ENST00000552123	ACE	P12821	1306 aa		9.05	□□□□□ -0.96
NPIPB12-208	ENST00000552123	TTC21B	Q7Z4L5	1316 aa		9.05	□□□□□ -0.96
NPIPB12-208	ENST00000552123	OVOS2	A0A0J9YW53	1432 aa		9.05	□□□□□ -0.96
NPIPB12-208	ENST00000552123	OVOS2	Q6IE36	1432 aa		9.05	□□□□□ -0.96
NPIPB12-208	ENST00000552123	CASZ1	Q86V15	1759 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms