RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 HOXC9P31274 260 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 SSH1Q8WYL5 1049 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 MAP2P11137 1827 aaKnown RBP10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 KCNH5Q8NCM2 988 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 NLRP2Q9NX02 1062 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 KIAA0232Q92628 1395 aa10.27□□□□□ -0.76
RAB3IP-215ENST00000551641 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
RAB3IP-215ENST00000551641 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-215ENST00000551641 PRKAR2BP31323 418 aa10.27□□□□□ -0.77
RAB3IP-215ENST00000551641 RIPK4P57078 832 aa10.27□□□□□ -0.77
RAB3IP-215ENST00000551641 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.77
RAB3IP-215ENST00000551641 EVA1CP58658 441 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 TBC1D32Q96NH3 1257 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 RSPH6AQ9H0K4 717 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 CCDC9Q9Y3X0 531 aaKnown RBP10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 PXDNQ92626 1479 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 ZNF428Q96B54 188 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
RAB3IP-215ENST00000551641 GSE1Q14687 1217 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 NRKQ7Z2Y5 1582 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 IL13P35225 146 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 ARHGEF25Q86VW2 580 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 BECN1Q14457 450 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 EYA1Q99502 592 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 AATKQ6ZMQ8 1374 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
RAB3IP-215ENST00000551641 CDK12Q9NYV4 1490 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 ARHGEF10O15013 1369 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 BTG4Q9NY30 223 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 FLT4P35916 1363 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 NBPF6Q5VWK0 638 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 TOM1L2Q6ZVM7 507 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 IP6K1Q92551 441 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 NBPF4Q96M43 638 aa10.24□□□□□ -0.77
RAB3IP-215ENST00000551641 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
RAB3IP-215ENST00000551641 UPF2Q9HAU5 1272 aaKnown RBP10.23□□□□□ -0.77
RAB3IP-215ENST00000551641 A0A0G2JS52 829 aa10.23□□□□□ -0.77
RAB3IP-215ENST00000551641 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
RAB3IP-215ENST00000551641 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
RAB3IP-215ENST00000551641 DCTN1Q14203 1278 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 ITPRIPQ8IWB1 547 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 FRAT2O75474 233 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 NFE2L2Q16236 605 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 MED1Q15648 1581 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-215ENST00000551641 ZNF853P0CG23 659 aa10.21□□□□□ -0.78
RAB3IP-215ENST00000551641 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.78
RAB3IP-215ENST00000551641 LARP1Q6PKG0 1096 aaKnown RBP10.21□□□□□ -0.78
RAB3IP-215ENST00000551641 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.78
RAB3IP-215ENST00000551641 PHLPP1O60346 1717 aa10.2□□□□□ -0.78
RAB3IP-215ENST00000551641 TRPM3Q9HCF6 1732 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-215ENST00000551641 IFT57Q9NWB7 429 aa10.2□□□□□ -0.78
RAB3IP-215ENST00000551641 PEAK1Q9H792 1746 aa10.2□□□□□ -0.78
RAB3IP-215ENST00000551641 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
RAB3IP-215ENST00000551641 VAMP4O75379 141 aa10.19□□□□□ -0.78
RAB3IP-215ENST00000551641 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
RAB3IP-215ENST00000551641 NUCB1Q02818 461 aa10.19□□□□□ -0.78
RAB3IP-215ENST00000551641 TBC1D2Q9BYX2 928 aa10.19□□□□□ -0.78
RAB3IP-215ENST00000551641 GNAI1P63096 354 aa10.18□□□□□ -0.78
RAB3IP-215ENST00000551641 MCM10Q7L590 875 aa10.18□□□□□ -0.78
RAB3IP-215ENST00000551641 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
RAB3IP-215ENST00000551641 LTN1O94822 1766 aa10.18□□□□□ -0.78
RAB3IP-215ENST00000551641 ERBB3P21860 1342 aa10.18□□□□□ -0.78
RAB3IP-215ENST00000551641 NFAT5O94916 1531 aa10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 CHMP4BQ9H444 224 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 ALS2Q96Q42 1657 aa10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 RAPGEF4Q8WZA2 1011 aa10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 MARF1Q9Y4F3 1742 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 ABCC4O15439 1325 aa10.17□□□□□ -0.78
RAB3IP-215ENST00000551641 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 MTHFSDQ2M296 383 aaKnown RBP10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 MIS18AQ9NYP9 233 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 NHSL1Q5SYE7 1610 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 RGPD5Q99666 1765 aa10.16□□□□□ -0.78
RAB3IP-215ENST00000551641 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
RAB3IP-215ENST00000551641 ELL2O00472 640 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-215ENST00000551641 CHD1LQ86WJ1 897 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms