RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 MEGF6O75095 1541 aa25.93■■□□□ 1.74
DDX54-208ENST00000551344 PSDA5PKW4 1024 aaPredicted RBP25.92■■□□□ 1.74
DDX54-208ENST00000551344 EYA1Q99502 592 aa25.92■■□□□ 1.74
DDX54-208ENST00000551344 R3HDM1Q15032 1099 aaKnown RBP25.91■■□□□ 1.74
DDX54-208ENST00000551344 EIF4A2Q14240 407 aaKnown RBP25.9■■□□□ 1.74
DDX54-208ENST00000551344 PROM2Q8N271 834 aa25.9■■□□□ 1.74
DDX54-208ENST00000551344 NCAPD2Q15021 1401 aa25.88■■□□□ 1.73
DDX54-208ENST00000551344 KAT6BQ8WYB5 2073 aa25.87■■□□□ 1.73
DDX54-208ENST00000551344 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
DDX54-208ENST00000551344 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
DDX54-208ENST00000551344 RREB1Q92766 1687 aa25.87■■□□□ 1.73
DDX54-208ENST00000551344 TXNRD1Q16881 649 aa25.86■■□□□ 1.73
DDX54-208ENST00000551344 PCDH11XQ9BZA7 1347 aa25.86■■□□□ 1.73
DDX54-208ENST00000551344 PCDH11YQ9BZA8 1340 aa25.86■■□□□ 1.73
DDX54-208ENST00000551344 NHSQ6T4R5 1651 aa25.85■■□□□ 1.73
DDX54-208ENST00000551344 PRIM1P49642 420 aaKnown RBP25.84■■□□□ 1.73
DDX54-208ENST00000551344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.84■■□□□ 1.73
DDX54-208ENST00000551344 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.73
DDX54-208ENST00000551344 SPG7Q9UQ90 795 aa25.83■■□□□ 1.73
DDX54-208ENST00000551344 CC2D1BQ5T0F9 858 aaKnown RBP25.82■■□□□ 1.72
DDX54-208ENST00000551344 SYTL4Q96C24 671 aaPredicted RBP25.82■■□□□ 1.72
DDX54-208ENST00000551344 NUP188Q5SRE5 1749 aa25.82■■□□□ 1.72
DDX54-208ENST00000551344 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
DDX54-208ENST00000551344 IGSF1Q8N6C5 1336 aa25.81■■□□□ 1.72
DDX54-208ENST00000551344 CYP27B1O15528 508 aa25.8■■□□□ 1.72
DDX54-208ENST00000551344 SHANK3Q9BYB0 1731 aa25.79■■□□□ 1.72
DDX54-208ENST00000551344 MTHFSP49914 203 aa25.78■■□□□ 1.72
DDX54-208ENST00000551344 PLEKHG2Q9H7P9 1386 aa25.78■■□□□ 1.72
DDX54-208ENST00000551344 NKX1-1Q15270 411 aaPredicted RBP25.77■■□□□ 1.72
DDX54-208ENST00000551344 BTAF1O14981 1849 aa25.75■■□□□ 1.71
DDX54-208ENST00000551344 IL13P35225 146 aa25.75■■□□□ 1.71
DDX54-208ENST00000551344 SLC27A3Q5K4L6 730 aa25.75■■□□□ 1.71
DDX54-208ENST00000551344 ANO8Q9HCE9 1232 aaPredicted RBP25.75■■□□□ 1.71
DDX54-208ENST00000551344 IFNL2Q8IZJ0 200 aa25.74■■□□□ 1.71
DDX54-208ENST00000551344 STK32BQ9NY57 414 aa25.74■■□□□ 1.71
DDX54-208ENST00000551344 SLC15A2Q16348 729 aa25.73■■□□□ 1.71
DDX54-208ENST00000551344 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
DDX54-208ENST00000551344 PLEKHO1Q53GL0 409 aaPredicted RBP25.71■■□□□ 1.71
DDX54-208ENST00000551344 LRRC4BQ9NT99 713 aa25.71■■□□□ 1.71
DDX54-208ENST00000551344 PHKG2P15735 406 aa25.7■■□□□ 1.7
DDX54-208ENST00000551344 AMOTQ4VCS5 1084 aa25.7■■□□□ 1.7
DDX54-208ENST00000551344 DOT1LQ8TEK3 1739 aa25.7■■□□□ 1.7
DDX54-208ENST00000551344 CNGB1Q14028 1251 aaPredicted RBP25.69■■□□□ 1.7
DDX54-208ENST00000551344 SULT6B1Q6IMI4 303 aa25.69■■□□□ 1.7
DDX54-208ENST00000551344 MPRIPQ6WCQ1 1025 aa25.69■■□□□ 1.7
DDX54-208ENST00000551344 LRP5O75197 1615 aa25.68■■□□□ 1.7
DDX54-208ENST00000551344 AEBP1Q8IUX7 1158 aa25.68■■□□□ 1.7
DDX54-208ENST00000551344 DIAPH1O60610 1272 aaKnown RBP25.67■■□□□ 1.7
DDX54-208ENST00000551344 KDRP35968 1356 aa25.67■■□□□ 1.7
DDX54-208ENST00000551344 HSP90AB1P08238 724 aaKnown RBP25.66■■□□□ 1.7
DDX54-208ENST00000551344 HMGB2P26583 209 aaKnown RBP25.66■■□□□ 1.7
DDX54-208ENST00000551344 SPON1Q9HCB6 807 aa25.65■■□□□ 1.7
DDX54-208ENST00000551344 PIGBQ92521 554 aa25.64■■□□□ 1.7
DDX54-208ENST00000551344 SMARCC1Q92922 1105 aaPredicted RBP25.64■■□□□ 1.7
DDX54-208ENST00000551344 CCNL1Q9UK58 526 aaPredicted RBP25.64■■□□□ 1.7
DDX54-208ENST00000551344 ZNF530Q6P9A1 599 aaPredicted RBP25.62■■□□□ 1.69
DDX54-208ENST00000551344 AKT1S1Q96B36 256 aa25.62■■□□□ 1.69
DDX54-208ENST00000551344 DCAF5Q96JK2 942 aa25.62■■□□□ 1.69
DDX54-208ENST00000551344 TMOD3Q9NYL9 352 aa25.62■■□□□ 1.69
DDX54-208ENST00000551344 KCNQ4P56696 695 aa25.61■■□□□ 1.69
DDX54-208ENST00000551344 PDGFDQ9GZP0 370 aaPredicted RBP25.61■■□□□ 1.69
DDX54-208ENST00000551344 ERVV-2B6SEH9 535 aa25.6■■□□□ 1.69
DDX54-208ENST00000551344 ZNF827Q17R98 1081 aa25.6■■□□□ 1.69
DDX54-208ENST00000551344 PALLDQ8WX93 1383 aa25.59■■□□□ 1.69
DDX54-208ENST00000551344 C1orf141Q5JVX7 400 aa25.59■■□□□ 1.69
DDX54-208ENST00000551344 LY75O60449 1722 aa25.59■■□□□ 1.69
DDX54-208ENST00000551344 PAPPAQ13219 1627 aa25.59■■□□□ 1.69
DDX54-208ENST00000551344 HMOX1P09601 288 aa25.58■■□□□ 1.69
DDX54-208ENST00000551344 CFAP53Q96M91 514 aa25.57■■□□□ 1.68
DDX54-208ENST00000551344 TOGARAM1Q9Y4F4 1720 aa25.57■■□□□ 1.68
DDX54-208ENST00000551344 ITGB4P16144 1822 aa25.56■■□□□ 1.68
DDX54-208ENST00000551344 PPP2R1AP30153 589 aa25.56■■□□□ 1.68
DDX54-208ENST00000551344 TFCP2L1Q9NZI6 479 aa25.56■■□□□ 1.68
DDX54-208ENST00000551344 ZBTB7AO95365 584 aa25.55■■□□□ 1.68
DDX54-208ENST00000551344 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
DDX54-208ENST00000551344 MTFR1LQ9H019 292 aa25.54■■□□□ 1.68
DDX54-208ENST00000551344 U2SURPO15042 1029 aaKnown RBP25.53■■□□□ 1.68
DDX54-208ENST00000551344 AKAP4Q5JQC9 854 aa25.53■■□□□ 1.68
DDX54-208ENST00000551344 ASAP1Q9ULH1 1129 aa25.53■■□□□ 1.68
DDX54-208ENST00000551344 COL3A1P02461 1466 aaPredicted RBP25.53■■□□□ 1.68
DDX54-208ENST00000551344 CABP4P57796 275 aa25.52■■□□□ 1.68
DDX54-208ENST00000551344 SLC16A10Q8TF71 515 aa25.52■■□□□ 1.68
DDX54-208ENST00000551344 ATG3Q9NT62 314 aa25.52■■□□□ 1.68
DDX54-208ENST00000551344 PPP1R1BQ9UD71 204 aaPredicted RBP25.52■■□□□ 1.68
DDX54-208ENST00000551344 ATF5Q9Y2D1 282 aaPredicted RBP25.52■■□□□ 1.68
DDX54-208ENST00000551344 LOC102724428A0A0B4J2F2 783 aa25.51■■□□□ 1.67
DDX54-208ENST00000551344 ZEB1P37275 1124 aaPredicted RBP25.51■■□□□ 1.67
DDX54-208ENST00000551344 SIK1P57059 783 aa25.51■■□□□ 1.67
DDX54-208ENST00000551344 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
DDX54-208ENST00000551344 KDM6AO15550 1401 aaPredicted RBP25.5■■□□□ 1.67
DDX54-208ENST00000551344 PNPLA7Q6ZV29 1317 aa25.5■■□□□ 1.67
DDX54-208ENST00000551344 PTGER2P43116 358 aa25.49■■□□□ 1.67
DDX54-208ENST00000551344 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
DDX54-208ENST00000551344 NFATC2IPQ8NCF5 419 aa25.47■■□□□ 1.67
DDX54-208ENST00000551344 ATP6V1AP38606 617 aa25.46■■□□□ 1.67
DDX54-208ENST00000551344 FLAD1Q8NFF5 587 aa25.46■■□□□ 1.67
DDX54-208ENST00000551344 DDX10Q13206 875 aaKnown RBP25.45■■□□□ 1.66
DDX54-208ENST00000551344 SGIP1Q9BQI5 828 aa25.45■■□□□ 1.66
DDX54-208ENST00000551344 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
DDX54-208ENST00000551344 RNMTO43148 476 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms