RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
PFDN5-213ENST00000550964 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
PFDN5-213ENST00000550964 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
PFDN5-213ENST00000550964 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
PFDN5-213ENST00000550964 EYA1Q99502 592 aa13.48□□□□□ -0.25
PFDN5-213ENST00000550964 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
PFDN5-213ENST00000550964 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
PFDN5-213ENST00000550964 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
PFDN5-213ENST00000550964 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
PFDN5-213ENST00000550964 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-213ENST00000550964 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
PFDN5-213ENST00000550964 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-213ENST00000550964 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-213ENST00000550964 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
PFDN5-213ENST00000550964 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
PFDN5-213ENST00000550964 TRIM37O94972 964 aa13.44□□□□□ -0.26
PFDN5-213ENST00000550964 NEFMP07197 916 aa13.44□□□□□ -0.26
PFDN5-213ENST00000550964 IL13P35225 146 aa13.44□□□□□ -0.26
PFDN5-213ENST00000550964 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
PFDN5-213ENST00000550964 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
PFDN5-213ENST00000550964 PLSCR1O15162 318 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 APBA3O96018 575 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 MEGF6O75095 1541 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 KDRP35968 1356 aa13.43□□□□□ -0.26
PFDN5-213ENST00000550964 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-213ENST00000550964 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
PFDN5-213ENST00000550964 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
PFDN5-213ENST00000550964 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
PFDN5-213ENST00000550964 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
PFDN5-213ENST00000550964 SULT6B1Q6IMI4 303 aa13.41□□□□□ -0.26
PFDN5-213ENST00000550964 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
PFDN5-213ENST00000550964 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
PFDN5-213ENST00000550964 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
PFDN5-213ENST00000550964 NBPF14Q5TI25 921 aa13.39□□□□□ -0.27
PFDN5-213ENST00000550964 FCHSD2O94868 740 aa13.38□□□□□ -0.27
PFDN5-213ENST00000550964 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
PFDN5-213ENST00000550964 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PFDN5-213ENST00000550964 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
PFDN5-213ENST00000550964 ITGB4P16144 1822 aa13.37□□□□□ -0.27
PFDN5-213ENST00000550964 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
PFDN5-213ENST00000550964 SMARCC1Q92922 1105 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-213ENST00000550964 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-213ENST00000550964 ERVV-2B6SEH9 535 aa13.36□□□□□ -0.27
PFDN5-213ENST00000550964 PHKG2P15735 406 aa13.36□□□□□ -0.27
PFDN5-213ENST00000550964 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-213ENST00000550964 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
PFDN5-213ENST00000550964 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-213ENST00000550964 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-213ENST00000550964 RREB1Q92766 1687 aa13.35□□□□□ -0.27
PFDN5-213ENST00000550964 VIRMAQ69YN4 1812 aaKnown RBP13.35□□□□□ -0.27
PFDN5-213ENST00000550964 CYP27B1O15528 508 aa13.35□□□□□ -0.27
PFDN5-213ENST00000550964 ANP32CO43423 234 aa13.35□□□□□ -0.27
PFDN5-213ENST00000550964 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-213ENST00000550964 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
PFDN5-213ENST00000550964 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
PFDN5-213ENST00000550964 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
PFDN5-213ENST00000550964 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-213ENST00000550964 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
PFDN5-213ENST00000550964 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
PFDN5-213ENST00000550964 ACSBG1Q96GR2 724 aa13.34□□□□□ -0.27
PFDN5-213ENST00000550964 TMOD3Q9NYL9 352 aa13.34□□□□□ -0.27
PFDN5-213ENST00000550964 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
PFDN5-213ENST00000550964 HMOX1P09601 288 aa13.33□□□□□ -0.28
PFDN5-213ENST00000550964 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
PFDN5-213ENST00000550964 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
PFDN5-213ENST00000550964 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
PFDN5-213ENST00000550964 LY75O60449 1722 aa13.32□□□□□ -0.28
PFDN5-213ENST00000550964 KCNQ2O43526 872 aa13.31□□□□□ -0.28
PFDN5-213ENST00000550964 HTATSF1O43719 755 aaKnown RBP13.31□□□□□ -0.28
PFDN5-213ENST00000550964 CABP4P57796 275 aa13.31□□□□□ -0.28
PFDN5-213ENST00000550964 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
PFDN5-213ENST00000550964 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
PFDN5-213ENST00000550964 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
PFDN5-213ENST00000550964 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
PFDN5-213ENST00000550964 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
PFDN5-213ENST00000550964 RTF1Q92541 710 aaKnown RBP13.3□□□□□ -0.28
PFDN5-213ENST00000550964 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
PFDN5-213ENST00000550964 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PFDN5-213ENST00000550964 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
PFDN5-213ENST00000550964 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
PFDN5-213ENST00000550964 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
PFDN5-213ENST00000550964 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
PFDN5-213ENST00000550964 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
PFDN5-213ENST00000550964 TEFQ10587 303 aa13.27□□□□□ -0.29
PFDN5-213ENST00000550964 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
PFDN5-213ENST00000550964 QSER1Q2KHR3 1735 aa13.26□□□□□ -0.29
PFDN5-213ENST00000550964 PIGBQ92521 554 aa13.26□□□□□ -0.29
PFDN5-213ENST00000550964 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-213ENST00000550964 ADAMTS7Q9UKP4 1686 aa13.26□□□□□ -0.29
PFDN5-213ENST00000550964 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
PFDN5-213ENST00000550964 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
PFDN5-213ENST00000550964 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
PFDN5-213ENST00000550964 SLC15A2Q16348 729 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms