RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 MTHFSP49914 203 aa16.28■□□□□ 0.2
ERBB3-216ENST00000550869 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
ERBB3-216ENST00000550869 PROM2Q8N271 834 aa16.28■□□□□ 0.2
ERBB3-216ENST00000550869 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
ERBB3-216ENST00000550869 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
ERBB3-216ENST00000550869 IL2RBP14784 551 aa16.27■□□□□ 0.2
ERBB3-216ENST00000550869 FBLN1P23142 703 aa16.27■□□□□ 0.2
ERBB3-216ENST00000550869 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
ERBB3-216ENST00000550869 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
ERBB3-216ENST00000550869 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.2
ERBB3-216ENST00000550869 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
ERBB3-216ENST00000550869 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
ERBB3-216ENST00000550869 STK32BQ9NY57 414 aa16.26■□□□□ 0.19
ERBB3-216ENST00000550869 BTAF1O14981 1849 aa16.25■□□□□ 0.19
ERBB3-216ENST00000550869 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
ERBB3-216ENST00000550869 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
ERBB3-216ENST00000550869 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
ERBB3-216ENST00000550869 PAPPAQ13219 1627 aa16.23■□□□□ 0.19
ERBB3-216ENST00000550869 RRS1Q15050 365 aaKnown RBP16.23■□□□□ 0.19
ERBB3-216ENST00000550869 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
ERBB3-216ENST00000550869 IP6K1Q92551 441 aa16.23■□□□□ 0.19
ERBB3-216ENST00000550869 EMILIN1Q9Y6C2 1016 aa16.23■□□□□ 0.19
ERBB3-216ENST00000550869 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
ERBB3-216ENST00000550869 UTRNP46939 3433 aa16.22■□□□□ 0.19
ERBB3-216ENST00000550869 QSER1Q2KHR3 1735 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 YY1P25490 414 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 PTGER2P43116 358 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
ERBB3-216ENST00000550869 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
ERBB3-216ENST00000550869 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
ERBB3-216ENST00000550869 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
ERBB3-216ENST00000550869 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
ERBB3-216ENST00000550869 FLT4P35916 1363 aa16.18■□□□□ 0.18
ERBB3-216ENST00000550869 HOXC9P31274 260 aa16.17■□□□□ 0.18
ERBB3-216ENST00000550869 IL13P35225 146 aa16.17■□□□□ 0.18
ERBB3-216ENST00000550869 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
ERBB3-216ENST00000550869 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
ERBB3-216ENST00000550869 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
ERBB3-216ENST00000550869 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-216ENST00000550869 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
ERBB3-216ENST00000550869 AMPHP49418 695 aa16.15■□□□□ 0.18
ERBB3-216ENST00000550869 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
ERBB3-216ENST00000550869 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-216ENST00000550869 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
ERBB3-216ENST00000550869 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
ERBB3-216ENST00000550869 LY75O60449 1722 aa16.14■□□□□ 0.17
ERBB3-216ENST00000550869 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
ERBB3-216ENST00000550869 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
ERBB3-216ENST00000550869 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
ERBB3-216ENST00000550869 DDX54Q8TDD1 881 aaKnown RBP16.13■□□□□ 0.17
ERBB3-216ENST00000550869 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
ERBB3-216ENST00000550869 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
ERBB3-216ENST00000550869 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
ERBB3-216ENST00000550869 SLC16A10Q8TF71 515 aa16.12■□□□□ 0.17
ERBB3-216ENST00000550869 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
ERBB3-216ENST00000550869 ZCRB1Q8TBF4 217 aaKnown RBP16.11■□□□□ 0.17
ERBB3-216ENST00000550869 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
ERBB3-216ENST00000550869 FHDC1Q9C0D6 1143 aaPredicted RBP16.11■□□□□ 0.17
ERBB3-216ENST00000550869 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
ERBB3-216ENST00000550869 CHD4Q14839 1912 aa16.11■□□□□ 0.17
ERBB3-216ENST00000550869 MEGF6O75095 1541 aa16.1■□□□□ 0.17
ERBB3-216ENST00000550869 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
ERBB3-216ENST00000550869 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
ERBB3-216ENST00000550869 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
ERBB3-216ENST00000550869 ARXQ96QS3 562 aa16.1■□□□□ 0.17
ERBB3-216ENST00000550869 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
ERBB3-216ENST00000550869 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
ERBB3-216ENST00000550869 GOLGB1Q14789 3259 aaKnown RBP16.09■□□□□ 0.17
ERBB3-216ENST00000550869 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
ERBB3-216ENST00000550869 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
ERBB3-216ENST00000550869 FCHSD2O94868 740 aa16.07■□□□□ 0.16
ERBB3-216ENST00000550869 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
ERBB3-216ENST00000550869 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
ERBB3-216ENST00000550869 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
ERBB3-216ENST00000550869 KDRP35968 1356 aa16.06■□□□□ 0.16
ERBB3-216ENST00000550869 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
ERBB3-216ENST00000550869 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.163e-9■□□□□ 9.6
ERBB3-216ENST00000550869 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
ERBB3-216ENST00000550869 EYA1Q99502 592 aa16.06■□□□□ 0.16
ERBB3-216ENST00000550869 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
ERBB3-216ENST00000550869 POLD1P28340 1107 aa16.05■□□□□ 0.16
ERBB3-216ENST00000550869 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
ERBB3-216ENST00000550869 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
ERBB3-216ENST00000550869 TFCP2L1Q9NZI6 479 aa16.05■□□□□ 0.16
ERBB3-216ENST00000550869 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
ERBB3-216ENST00000550869 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
ERBB3-216ENST00000550869 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
ERBB3-216ENST00000550869 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
ERBB3-216ENST00000550869 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
ERBB3-216ENST00000550869 C5P01031 1676 aa16.04■□□□□ 0.16
ERBB3-216ENST00000550869 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
ERBB3-216ENST00000550869 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
ERBB3-216ENST00000550869 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
ERBB3-216ENST00000550869 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
ERBB3-216ENST00000550869 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
ERBB3-216ENST00000550869 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
ERBB3-216ENST00000550869 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
ERBB3-216ENST00000550869 HMOX1P09601 288 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms