RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
ATP2B1-207ENST00000550716 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
ATP2B1-207ENST00000550716 SLC34A2O95436 690 aa12.74□□□□□ -0.37
ATP2B1-207ENST00000550716 MFSD10Q14728 455 aa12.74□□□□□ -0.37
ATP2B1-207ENST00000550716 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
ATP2B1-207ENST00000550716 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
ATP2B1-207ENST00000550716 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
ATP2B1-207ENST00000550716 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
ATP2B1-207ENST00000550716 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
ATP2B1-207ENST00000550716 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
ATP2B1-207ENST00000550716 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
ATP2B1-207ENST00000550716 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
ATP2B1-207ENST00000550716 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.37
ATP2B1-207ENST00000550716 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
ATP2B1-207ENST00000550716 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
ATP2B1-207ENST00000550716 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
ATP2B1-207ENST00000550716 ACEP12821 1306 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 ITSN1Q15811 1721 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 HRCP23327 699 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
ATP2B1-207ENST00000550716 NUDT7P0C024 238 aa12.68□□□□□ -0.38
ATP2B1-207ENST00000550716 BAG6P46379 1132 aa12.68□□□□□ -0.38
ATP2B1-207ENST00000550716 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
ATP2B1-207ENST00000550716 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
ATP2B1-207ENST00000550716 ERBB3P21860 1342 aa12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 LRP5O75197 1615 aa12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 NBPF8Q3BBV2 869 aa12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 TNS1Q9HBL0 1735 aaKnown RBP12.67□□□□□ -0.38
ATP2B1-207ENST00000550716 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
ATP2B1-207ENST00000550716 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
ATP2B1-207ENST00000550716 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
ATP2B1-207ENST00000550716 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
ATP2B1-207ENST00000550716 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
ATP2B1-207ENST00000550716 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 USP19O94966 1318 aa12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
ATP2B1-207ENST00000550716 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
ATP2B1-207ENST00000550716 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
ATP2B1-207ENST00000550716 TRIM37O94972 964 aa12.64□□□□□ -0.39
ATP2B1-207ENST00000550716 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
ATP2B1-207ENST00000550716 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
ATP2B1-207ENST00000550716 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
ATP2B1-207ENST00000550716 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
ATP2B1-207ENST00000550716 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 CPDO75976 1380 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 TBC1D12O60347 775 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
ATP2B1-207ENST00000550716 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
ATP2B1-207ENST00000550716 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 GCP02774 474 aa12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
ATP2B1-207ENST00000550716 EVA1CP58658 441 aa12.59□□□□□ -0.39
ATP2B1-207ENST00000550716 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
ATP2B1-207ENST00000550716 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
ATP2B1-207ENST00000550716 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
ATP2B1-207ENST00000550716 USP6P35125 1406 aa12.59□□□□□ -0.39
ATP2B1-207ENST00000550716 SLIT3O75094 1523 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 ZBTB7CA1YPR0 619 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 APBA3O96018 575 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
ATP2B1-207ENST00000550716 NLRP13Q86W25 1043 aa12.57□□□□□ -0.4
ATP2B1-207ENST00000550716 SIN3AQ96ST3 1273 aa12.57□□□□□ -0.4
ATP2B1-207ENST00000550716 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
ATP2B1-207ENST00000550716 RREB1Q92766 1687 aa12.57□□□□□ -0.4
ATP2B1-207ENST00000550716 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
ATP2B1-207ENST00000550716 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
ATP2B1-207ENST00000550716 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
ATP2B1-207ENST00000550716 NUP188Q5SRE5 1749 aa12.56□□□□□ -0.4
ATP2B1-207ENST00000550716 CRB1P82279 1406 aa12.55□□□□□ -0.4
ATP2B1-207ENST00000550716 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
ATP2B1-207ENST00000550716 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
ATP2B1-207ENST00000550716 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
ATP2B1-207ENST00000550716 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms