RNA–Protein interactions for RNA: ENST00000550632.5

USP15-216, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-216ENST00000550632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■■■□ 22.6
USP15-216ENST00000550632 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
USP15-216ENST00000550632 HTRA3P83110 453 aa21.45■■□□□ 1.02
USP15-216ENST00000550632 DOT1LQ8TEK3 1739 aa21.45■■□□□ 1.02
USP15-216ENST00000550632 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
USP15-216ENST00000550632 EVC2Q86UK5 1308 aa21.44■■□□□ 1.02
USP15-216ENST00000550632 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
USP15-216ENST00000550632 LTN1O94822 1766 aa21.43■■□□□ 1.02
USP15-216ENST00000550632 TOMM70O94826 608 aa21.42■■□□□ 1.02
USP15-216ENST00000550632 NME9Q86XW9 330 aa21.42■■□□□ 1.02
USP15-216ENST00000550632 TNS4Q8IZW8 715 aa21.42■■□□□ 1.02
USP15-216ENST00000550632 LTV1Q96GA3 475 aaPredicted RBP21.42■■□□□ 1.02
USP15-216ENST00000550632 PRELPP51888 382 aa21.39■■□□□ 1.01
USP15-216ENST00000550632 SMIM5Q71RC9 77 aa21.38■■□□□ 1.01
USP15-216ENST00000550632 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
USP15-216ENST00000550632 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
USP15-216ENST00000550632 USP47Q96K76 1375 aa21.37■■□□□ 1.01
USP15-216ENST00000550632 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
USP15-216ENST00000550632 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
USP15-216ENST00000550632 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
USP15-216ENST00000550632 C5P01031 1676 aa21.35■■□□□ 1.01
USP15-216ENST00000550632 MON2Q7Z3U7 1717 aa21.33■■□□□ 1.01
USP15-216ENST00000550632 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
USP15-216ENST00000550632 FLAD1Q8NFF5 587 aa21.33■■□□□ 1.01
USP15-216ENST00000550632 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
USP15-216ENST00000550632 PHF14O94880 888 aa21.32■■□□□ 1
USP15-216ENST00000550632 USP54Q70EL1 1684 aa21.31■■□□□ 1
USP15-216ENST00000550632 IP6K1Q92551 441 aa21.3■■□□□ 1
USP15-216ENST00000550632 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
USP15-216ENST00000550632 MEGF6O75095 1541 aa21.29■■□□□ 1
USP15-216ENST00000550632 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
USP15-216ENST00000550632 RBM46Q8TBY0 533 aaKnown RBP21.28■■□□□ 1
USP15-216ENST00000550632 TAF1LQ8IZX4 1826 aa21.27■■□□□ 1
USP15-216ENST00000550632 TOGARAM1Q9Y4F4 1720 aa21.27■■□□□ 1
USP15-216ENST00000550632 PALLDQ8WX93 1383 aa21.27■■□□□ 1
USP15-216ENST00000550632 AK7Q96M32 723 aa21.27■■□□□ 1
USP15-216ENST00000550632 FAM208AQ9UK61 1670 aaKnown RBP21.27■■□□□ 1
USP15-216ENST00000550632 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
USP15-216ENST00000550632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.26■□□□□ 0.99
USP15-216ENST00000550632 ARHGAP27Q6ZUM4 889 aa21.26■□□□□ 0.99
USP15-216ENST00000550632 BCS1LQ9Y276 419 aa21.26■□□□□ 0.99
USP15-216ENST00000550632 CD163L1Q9NR16 1453 aa21.26■□□□□ 0.99
USP15-216ENST00000550632 C4BP0C0L5 1744 aa21.25■□□□□ 0.99
USP15-216ENST00000550632 C16orf71Q8IYS4 520 aaPredicted RBP21.25■□□□□ 0.99
USP15-216ENST00000550632 FBLN1P23142 703 aa21.24■□□□□ 0.99
USP15-216ENST00000550632 TMC1Q8TDI8 760 aa21.24■□□□□ 0.99
USP15-216ENST00000550632 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
USP15-216ENST00000550632 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
USP15-216ENST00000550632 PXDNLA1KZ92 1463 aa21.22■□□□□ 0.99
USP15-216ENST00000550632 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
USP15-216ENST00000550632 PCNTO95613 3336 aa21.22■□□□□ 0.99
USP15-216ENST00000550632 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
USP15-216ENST00000550632 N4BP2Q86UW6 1770 aaPredicted RBP21.21■□□□□ 0.99
USP15-216ENST00000550632 HOXC9P31274 260 aa21.2■□□□□ 0.98
USP15-216ENST00000550632 FSTL1Q12841 308 aa21.2■□□□□ 0.98
USP15-216ENST00000550632 SLC12A5Q9H2X9 1139 aa21.2■□□□□ 0.98
USP15-216ENST00000550632 C9orf131Q5VYM1 1079 aa21.19■□□□□ 0.98
USP15-216ENST00000550632 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
USP15-216ENST00000550632 KIAA1551Q9HCM1 1747 aa21.18■□□□□ 0.98
USP15-216ENST00000550632 MMP10P09238 476 aa21.18■□□□□ 0.98
USP15-216ENST00000550632 AMPHP49418 695 aa21.18■□□□□ 0.98
USP15-216ENST00000550632 NBPF6Q5VWK0 638 aa21.18■□□□□ 0.98
USP15-216ENST00000550632 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
USP15-216ENST00000550632 NBPF4Q96M43 638 aa21.18■□□□□ 0.98
USP15-216ENST00000550632 HSPA1AP0DMV8 641 aaKnown RBP21.17■□□□□ 0.98
USP15-216ENST00000550632 HSPA1BP0DMV9 641 aaKnown RBP21.17■□□□□ 0.98
USP15-216ENST00000550632 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
USP15-216ENST00000550632 KCPQ6ZWJ8 1503 aa21.17■□□□□ 0.98
USP15-216ENST00000550632 FCHSD2O94868 740 aa21.16■□□□□ 0.98
USP15-216ENST00000550632 SSFA2P28290 1259 aa21.16■□□□□ 0.98
USP15-216ENST00000550632 LINC00116Q8NCU8 138 aa21.16■□□□□ 0.98
USP15-216ENST00000550632 RRAGCQ9HB90 399 aa21.16■□□□□ 0.98
USP15-216ENST00000550632 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
USP15-216ENST00000550632 DPEP1P16444 411 aa21.15■□□□□ 0.98
USP15-216ENST00000550632 L3MBTL2Q969R5 705 aa21.15■□□□□ 0.98
USP15-216ENST00000550632 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
USP15-216ENST00000550632 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
USP15-216ENST00000550632 NSD3Q9BZ95 1437 aa21.13■□□□□ 0.97
USP15-216ENST00000550632 A0A1W2PP64 1363 aa21.13■□□□□ 0.97
USP15-216ENST00000550632 GNPATO15228 680 aa21.13■□□□□ 0.97
USP15-216ENST00000550632 SLC34A2O95436 690 aa21.13■□□□□ 0.97
USP15-216ENST00000550632 TGFB2P61812 414 aa21.13■□□□□ 0.97
USP15-216ENST00000550632 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
USP15-216ENST00000550632 TATP17735 454 aaPredicted RBP21.12■□□□□ 0.97
USP15-216ENST00000550632 KIF13BQ9NQT8 1826 aa21.12■□□□□ 0.97
USP15-216ENST00000550632 PCDH11XQ9BZA7 1347 aa21.11■□□□□ 0.97
USP15-216ENST00000550632 PCDH11YQ9BZA8 1340 aa21.11■□□□□ 0.97
USP15-216ENST00000550632 PIGBQ92521 554 aa21.11■□□□□ 0.97
USP15-216ENST00000550632 CGNL1Q0VF96 1302 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 CYP27B1O15528 508 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 ITGB4P16144 1822 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
USP15-216ENST00000550632 LOC102724428A0A0B4J2F2 783 aa21.09■□□□□ 0.97
USP15-216ENST00000550632 SIK1P57059 783 aa21.09■□□□□ 0.97
USP15-216ENST00000550632 ITPK1Q13572 414 aa21.09■□□□□ 0.97
USP15-216ENST00000550632 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
USP15-216ENST00000550632 SMC1BQ8NDV3 1235 aa21.09■□□□□ 0.97
USP15-216ENST00000550632 COG3Q96JB2 828 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms