RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 ATF7IPQ6VMQ6 1270 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
RAB3IP-212ENST00000550536 UBAC1Q9BSL1 405 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 TRIM21P19474 475 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 GBP2P32456 591 aaPredicted RBP14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 LARP1BQ659C4 914 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 PDCL3Q9H2J4 239 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 MVPQ14764 893 aaKnown RBP14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 CTNNA3Q9UI47 895 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 CDCA7LQ96GN5 454 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 CHD1LQ86WJ1 897 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 KRT32Q14532 448 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 WASF1Q92558 559 aa14.73□□□□□ -0.05
RAB3IP-212ENST00000550536 AFAP1Q8N556 730 aa14.72□□□□□ -0.05
RAB3IP-212ENST00000550536 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
RAB3IP-212ENST00000550536 CEP57L1Q8IYX8 460 aa14.72□□□□□ -0.05
RAB3IP-212ENST00000550536 TSPYL1Q9H0U9 437 aa14.72□□□□□ -0.05
RAB3IP-212ENST00000550536 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
RAB3IP-212ENST00000550536 DDX54Q8TDD1 881 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 SPATA32Q96LK8 384 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 BMP2KQ9NSY1 1161 aaPredicted RBP14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 CAMSAP2Q08AD1 1489 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 GOLGA6L7A0A1B0GV03 622 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 KIAA0754O94854 1291 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
RAB3IP-212ENST00000550536 SRGAP3O43295 1099 aa14.71□□□□□ -0.06
RAB3IP-212ENST00000550536 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.06
RAB3IP-212ENST00000550536 NSD3Q9BZ95 1437 aa14.71□□□□□ -0.06
RAB3IP-212ENST00000550536 ERLIN1O75477 346 aa14.7□□□□□ -0.06
RAB3IP-212ENST00000550536 CEP131Q9UPN4 1083 aa14.7□□□□□ -0.06
RAB3IP-212ENST00000550536 ANKRD30BQ9BXX2 1392 aa14.7□□□□□ -0.06
RAB3IP-212ENST00000550536 CWC27Q6UX04 472 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-212ENST00000550536 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
RAB3IP-212ENST00000550536 PDRG1Q9NUG6 133 aa14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 SEPT11Q9NVA2 429 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 SEC63Q9UGP8 760 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 NKTRP30414 1462 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 CASTP20810 708 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 CENPHQ9H3R5 247 aa14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 BCAR3O75815 825 aa14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 ZNF397Q8NF99 534 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-212ENST00000550536 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 IGHMBP2P38935 993 aaKnown RBP14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 GNAT3A8MTJ3 354 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 ZNF76P36508 570 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 ZNF428Q96B54 188 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
RAB3IP-212ENST00000550536 ANKRD62A6NC57 917 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 PPP1R12BO60237 982 aaPredicted RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 EZRP15311 586 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 CCDC112Q8NEF3 446 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 MPHOSPH10O00566 681 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 JAKMIP1Q96N16 626 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 RPGRIP1LQ68CZ1 1315 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 SMTNL1A8MU46 457 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 STARD3NLO95772 234 aa14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
RAB3IP-212ENST00000550536 KIAA1328Q86T90 577 aa14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 DNAI2Q9GZS0 605 aa14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 AIDAQ96BJ3 306 aa14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 PRDM11Q9NQV5 511 aa14.66□□□□□ -0.06
RAB3IP-212ENST00000550536 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 NUP62CLQ9H1M0 184 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 RRS1Q15050 365 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 CEP126Q9P2H0 1117 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 EIF2AK4Q9P2K8 1649 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 RAI14Q9P0K7 980 aa14.65□□□□□ -0.06
RAB3IP-212ENST00000550536 FCHSD2O94868 740 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 SSBP05455 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 TNIP1Q15025 636 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 PLEKHH1Q9ULM0 1364 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 GRPEL1Q9HAV7 217 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-212ENST00000550536 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms