RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
CHMP1A-208ENST00000550102 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
CHMP1A-208ENST00000550102 RAPGEF4Q8WZA2 1011 aa23.55■■□□□ 1.36
CHMP1A-208ENST00000550102 TATP17735 454 aaPredicted RBP23.51■■□□□ 1.35
CHMP1A-208ENST00000550102 ZCRB1Q8TBF4 217 aaKnown RBP23.51■■□□□ 1.35
CHMP1A-208ENST00000550102 PTF1AQ7RTS3 328 aa23.5■■□□□ 1.35
CHMP1A-208ENST00000550102 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
CHMP1A-208ENST00000550102 NPC1L1Q9UHC9 1359 aa23.5■■□□□ 1.35
CHMP1A-208ENST00000550102 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
CHMP1A-208ENST00000550102 PLSCR1O15162 318 aa23.48■■□□□ 1.35
CHMP1A-208ENST00000550102 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
CHMP1A-208ENST00000550102 ACSBG1Q96GR2 724 aa23.47■■□□□ 1.35
CHMP1A-208ENST00000550102 PCDH11XQ9BZA7 1347 aa23.47■■□□□ 1.35
CHMP1A-208ENST00000550102 PCDH11YQ9BZA8 1340 aa23.47■■□□□ 1.35
CHMP1A-208ENST00000550102 KCNQ2O43526 872 aa23.46■■□□□ 1.35
CHMP1A-208ENST00000550102 LRP5O75197 1615 aa23.46■■□□□ 1.35
CHMP1A-208ENST00000550102 EYA1Q99502 592 aa23.46■■□□□ 1.35
CHMP1A-208ENST00000550102 TOGARAM1Q9Y4F4 1720 aa23.46■■□□□ 1.35
CHMP1A-208ENST00000550102 PLEKHG2Q9H7P9 1386 aa23.44■■□□□ 1.34
CHMP1A-208ENST00000550102 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
CHMP1A-208ENST00000550102 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
CHMP1A-208ENST00000550102 ITGB4P16144 1822 aa23.44■■□□□ 1.34
CHMP1A-208ENST00000550102 PSDA5PKW4 1024 aaPredicted RBP23.43■■□□□ 1.34
CHMP1A-208ENST00000550102 LY75O60449 1722 aa23.42■■□□□ 1.34
CHMP1A-208ENST00000550102 R3HDM1Q15032 1099 aaKnown RBP23.41■■□□□ 1.34
CHMP1A-208ENST00000550102 SRCAPQ6ZRS2 3230 aa23.4■■□□□ 1.34
CHMP1A-208ENST00000550102 NBPF14Q5TI25 921 aa23.4■■□□□ 1.34
CHMP1A-208ENST00000550102 PAPPAQ13219 1627 aa23.4■■□□□ 1.34
CHMP1A-208ENST00000550102 SPG7Q9UQ90 795 aa23.39■■□□□ 1.33
CHMP1A-208ENST00000550102 SYTL4Q96C24 671 aaPredicted RBP23.38■■□□□ 1.33
CHMP1A-208ENST00000550102 CYP27B1O15528 508 aa23.37■■□□□ 1.33
CHMP1A-208ENST00000550102 TXNRD1Q16881 649 aa23.37■■□□□ 1.33
CHMP1A-208ENST00000550102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHMP1A-208ENST00000550102 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
CHMP1A-208ENST00000550102 MTHFSP49914 203 aa23.36■■□□□ 1.33
CHMP1A-208ENST00000550102 CASZ1Q86V15 1759 aa23.35■■□□□ 1.33
CHMP1A-208ENST00000550102 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
CHMP1A-208ENST00000550102 PROM2Q8N271 834 aa23.34■■□□□ 1.33
CHMP1A-208ENST00000550102 KDRP35968 1356 aa23.34■■□□□ 1.33
CHMP1A-208ENST00000550102 COL3A1P02461 1466 aaPredicted RBP23.34■■□□□ 1.33
CHMP1A-208ENST00000550102 IL13P35225 146 aa23.33■■□□□ 1.33
CHMP1A-208ENST00000550102 ANO8Q9HCE9 1232 aaPredicted RBP23.33■■□□□ 1.33
CHMP1A-208ENST00000550102 QSER1Q2KHR3 1735 aa23.32■■□□□ 1.32
CHMP1A-208ENST00000550102 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
CHMP1A-208ENST00000550102 C5P01031 1676 aa23.3■■□□□ 1.32
CHMP1A-208ENST00000550102 AEBP1Q8IUX7 1158 aa23.3■■□□□ 1.32
CHMP1A-208ENST00000550102 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
CHMP1A-208ENST00000550102 NKX1-1Q15270 411 aaPredicted RBP23.29■■□□□ 1.32
CHMP1A-208ENST00000550102 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
CHMP1A-208ENST00000550102 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
CHMP1A-208ENST00000550102 PHKG2P15735 406 aa23.28■■□□□ 1.32
CHMP1A-208ENST00000550102 IFNL2Q8IZJ0 200 aa23.28■■□□□ 1.32
CHMP1A-208ENST00000550102 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
CHMP1A-208ENST00000550102 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
CHMP1A-208ENST00000550102 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
CHMP1A-208ENST00000550102 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
CHMP1A-208ENST00000550102 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
CHMP1A-208ENST00000550102 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
CHMP1A-208ENST00000550102 ZNF530Q6P9A1 599 aaPredicted RBP23.25■■□□□ 1.31
CHMP1A-208ENST00000550102 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
CHMP1A-208ENST00000550102 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
CHMP1A-208ENST00000550102 SLC15A2Q16348 729 aa23.23■■□□□ 1.31
CHMP1A-208ENST00000550102 PALLDQ8WX93 1383 aa23.23■■□□□ 1.31
CHMP1A-208ENST00000550102 HSP90AB1P08238 724 aaKnown RBP23.22■■□□□ 1.31
CHMP1A-208ENST00000550102 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
CHMP1A-208ENST00000550102 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
CHMP1A-208ENST00000550102 KDM6AO15550 1401 aaPredicted RBP23.22■■□□□ 1.31
CHMP1A-208ENST00000550102 C1orf141Q5JVX7 400 aa23.21■■□□□ 1.31
CHMP1A-208ENST00000550102 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
CHMP1A-208ENST00000550102 CCNL1Q9UK58 526 aaPredicted RBP23.21■■□□□ 1.31
CHMP1A-208ENST00000550102 HMOX1P09601 288 aa23.2■■□□□ 1.3
CHMP1A-208ENST00000550102 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
CHMP1A-208ENST00000550102 SMARCC1Q92922 1105 aaPredicted RBP23.2■■□□□ 1.3
CHMP1A-208ENST00000550102 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
CHMP1A-208ENST00000550102 PIGBQ92521 554 aa23.19■■□□□ 1.3
CHMP1A-208ENST00000550102 ZNF827Q17R98 1081 aa23.18■■□□□ 1.3
CHMP1A-208ENST00000550102 C4BP0C0L5 1744 aa23.18■■□□□ 1.3
CHMP1A-208ENST00000550102 ZNF831Q5JPB2 1677 aa23.18■■□□□ 1.3
CHMP1A-208ENST00000550102 ADAMTS7Q9UKP4 1686 aa23.18■■□□□ 1.3
CHMP1A-208ENST00000550102 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
CHMP1A-208ENST00000550102 KCNQ4P56696 695 aa23.17■■□□□ 1.3
CHMP1A-208ENST00000550102 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
CHMP1A-208ENST00000550102 SPON1Q9HCB6 807 aa23.16■■□□□ 1.3
CHMP1A-208ENST00000550102 ERVV-2B6SEH9 535 aa23.15■■□□□ 1.3
CHMP1A-208ENST00000550102 MRC1P22897 1456 aa23.14■■□□□ 1.29
CHMP1A-208ENST00000550102 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
CHMP1A-208ENST00000550102 PDGFDQ9GZP0 370 aaPredicted RBP23.14■■□□□ 1.29
CHMP1A-208ENST00000550102 UBR3Q6ZT12 1888 aa23.13■■□□□ 1.29
CHMP1A-208ENST00000550102 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
CHMP1A-208ENST00000550102 COL24A1Q17RW2 1714 aa23.12■■□□□ 1.29
CHMP1A-208ENST00000550102 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
CHMP1A-208ENST00000550102 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
CHMP1A-208ENST00000550102 DDX10Q13206 875 aaKnown RBP23.11■■□□□ 1.29
CHMP1A-208ENST00000550102 ASAP1Q9ULH1 1129 aa23.11■■□□□ 1.29
CHMP1A-208ENST00000550102 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
CHMP1A-208ENST00000550102 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
CHMP1A-208ENST00000550102 CABP4P57796 275 aa23.1■■□□□ 1.29
CHMP1A-208ENST00000550102 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
CHMP1A-208ENST00000550102 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
CHMP1A-208ENST00000550102 SIK1P57059 783 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms