RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 TOM1L2Q6ZVM7 507 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
RPH3A-217ENST00000549913 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 TCEAL9Q9UHQ7 104 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
RPH3A-217ENST00000549913 NOS1P29475 1434 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
RPH3A-217ENST00000549913 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
RPH3A-217ENST00000549913 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 CCDC112Q8NEF3 446 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
RPH3A-217ENST00000549913 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
RPH3A-217ENST00000549913 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 DHX8Q14562 1220 aaKnown RBP13.35□□□□□ -0.27
RPH3A-217ENST00000549913 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
RPH3A-217ENST00000549913 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 MX1P20591 662 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 SSFA2P28290 1259 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 ME1P48163 572 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
RPH3A-217ENST00000549913 KRT32Q14532 448 aa13.34□□□□□ -0.27
RPH3A-217ENST00000549913 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
RPH3A-217ENST00000549913 CTDP1Q9Y5B0 961 aaPredicted RBP13.34□□□□□ -0.27
RPH3A-217ENST00000549913 CCDC66A2RUB6 948 aa13.33□□□□□ -0.27
RPH3A-217ENST00000549913 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.27
RPH3A-217ENST00000549913 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.27
RPH3A-217ENST00000549913 AK7Q96M32 723 aa13.33□□□□□ -0.28
RPH3A-217ENST00000549913 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
RPH3A-217ENST00000549913 KDM4AO75164 1064 aa13.33□□□□□ -0.28
RPH3A-217ENST00000549913 RUFY1Q96T51 708 aa13.33□□□□□ -0.28
RPH3A-217ENST00000549913 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
RPH3A-217ENST00000549913 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
RPH3A-217ENST00000549913 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
RPH3A-217ENST00000549913 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.28
RPH3A-217ENST00000549913 BMP2KLQ5H9B9 411 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 CFAP45Q9UL16 551 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
RPH3A-217ENST00000549913 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
RPH3A-217ENST00000549913 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 NACAP1Q9BZK3 213 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
RPH3A-217ENST00000549913 FANCAO15360 1455 aa13.32□□□□□ -0.28
RPH3A-217ENST00000549913 NOM1Q5C9Z4 860 aaKnown RBP13.32□□□□□ -0.28
RPH3A-217ENST00000549913 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 ERCC4Q92889 916 aaPredicted RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 SERPINC1P01008 464 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
RPH3A-217ENST00000549913 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 FBXO31Q5XUX0 539 aaPredicted RBP13.31□□□□□ -0.28
RPH3A-217ENST00000549913 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
RPH3A-217ENST00000549913 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
RPH3A-217ENST00000549913 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
RPH3A-217ENST00000549913 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPH3A-217ENST00000549913 IL16Q14005 1332 aa13.3□□□□□ -0.28
RPH3A-217ENST00000549913 TXLNAP40222 546 aa13.3□□□□□ -0.28
RPH3A-217ENST00000549913 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
RPH3A-217ENST00000549913 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
RPH3A-217ENST00000549913 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
RPH3A-217ENST00000549913 CWC15Q9P013 229 aaKnown RBP13.3□□□□□ -0.28
RPH3A-217ENST00000549913 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 TTLL5Q6EMB2 1281 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
RPH3A-217ENST00000549913 PTPRCP08575 1304 aa13.29□□□□□ -0.28
RPH3A-217ENST00000549913 F6X3S4 739 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 HDAC1Q13547 482 aaPredicted RBP13.28□□□□□ -0.28
RPH3A-217ENST00000549913 AMOTQ4VCS5 1084 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 CAGE1Q8TC20 777 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 NUP160Q12769 1436 aa13.28□□□□□ -0.28
RPH3A-217ENST00000549913 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
RPH3A-217ENST00000549913 OFD1O75665 1012 aa13.27□□□□□ -0.28
RPH3A-217ENST00000549913 CCDC83Q8IWF9 413 aa13.27□□□□□ -0.28
RPH3A-217ENST00000549913 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.28
RPH3A-217ENST00000549913 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.28
RPH3A-217ENST00000549913 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.28
RPH3A-217ENST00000549913 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.28
RPH3A-217ENST00000549913 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
RPH3A-217ENST00000549913 CDKL5O76039 1030 aa13.27□□□□□ -0.29
RPH3A-217ENST00000549913 FILIP1Q7Z7B0 1213 aa13.27□□□□□ -0.29
RPH3A-217ENST00000549913 ATP10BO94823 1461 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms