RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
PKP2-206ENST00000549461 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
PKP2-206ENST00000549461 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
PKP2-206ENST00000549461 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
PKP2-206ENST00000549461 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
PKP2-206ENST00000549461 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.44
PKP2-206ENST00000549461 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
PKP2-206ENST00000549461 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
PKP2-206ENST00000549461 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
PKP2-206ENST00000549461 VPS72Q15906 364 aa12.32□□□□□ -0.44
PKP2-206ENST00000549461 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
PKP2-206ENST00000549461 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
PKP2-206ENST00000549461 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
PKP2-206ENST00000549461 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
PKP2-206ENST00000549461 NEFMP07197 916 aa12.31□□□□□ -0.44
PKP2-206ENST00000549461 IL2RBP14784 551 aa12.31□□□□□ -0.44
PKP2-206ENST00000549461 ZNF530Q6P9A1 599 aaPredicted RBP12.31□□□□□ -0.44
PKP2-206ENST00000549461 GLI3P10071 1580 aa12.3□□□□□ -0.44
PKP2-206ENST00000549461 ATRNO75882 1429 aa12.3□□□□□ -0.44
PKP2-206ENST00000549461 PLEKHO1Q53GL0 409 aaPredicted RBP12.3□□□□□ -0.44
PKP2-206ENST00000549461 MCM10Q7L590 875 aa12.3□□□□□ -0.44
PKP2-206ENST00000549461 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
PKP2-206ENST00000549461 CYP27B1O15528 508 aa12.29□□□□□ -0.44
PKP2-206ENST00000549461 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
PKP2-206ENST00000549461 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
PKP2-206ENST00000549461 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
PKP2-206ENST00000549461 MAP3K5Q99683 1374 aa12.29□□□□□ -0.44
PKP2-206ENST00000549461 PHKG2P15735 406 aa12.28□□□□□ -0.44
PKP2-206ENST00000549461 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
PKP2-206ENST00000549461 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
PKP2-206ENST00000549461 ZCRB1Q8TBF4 217 aaKnown RBP12.28□□□□□ -0.44
PKP2-206ENST00000549461 LGR6Q9HBX8 967 aa12.28□□□□□ -0.44
PKP2-206ENST00000549461 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
PKP2-206ENST00000549461 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
PKP2-206ENST00000549461 MPRIPQ6WCQ1 1025 aa12.27□□□□□ -0.45
PKP2-206ENST00000549461 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
PKP2-206ENST00000549461 RGS17Q9UGC6 210 aaPredicted RBP12.27□□□□□ -0.45
PKP2-206ENST00000549461 SPG7Q9UQ90 795 aa12.27□□□□□ -0.45
PKP2-206ENST00000549461 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.45
PKP2-206ENST00000549461 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
PKP2-206ENST00000549461 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
PKP2-206ENST00000549461 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
PKP2-206ENST00000549461 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
PKP2-206ENST00000549461 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
PKP2-206ENST00000549461 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
PKP2-206ENST00000549461 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
PKP2-206ENST00000549461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
PKP2-206ENST00000549461 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
PKP2-206ENST00000549461 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
PKP2-206ENST00000549461 RNMTO43148 476 aaKnown RBP12.25□□□□□ -0.45
PKP2-206ENST00000549461 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
PKP2-206ENST00000549461 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
PKP2-206ENST00000549461 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
PKP2-206ENST00000549461 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
PKP2-206ENST00000549461 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
PKP2-206ENST00000549461 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
PKP2-206ENST00000549461 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
PKP2-206ENST00000549461 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
PKP2-206ENST00000549461 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
PKP2-206ENST00000549461 TOGARAM1Q9Y4F4 1720 aa12.23□□□□□ -0.45
PKP2-206ENST00000549461 EXOC5O00471 708 aa12.23□□□□□ -0.45
PKP2-206ENST00000549461 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
PKP2-206ENST00000549461 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
PKP2-206ENST00000549461 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
PKP2-206ENST00000549461 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
PKP2-206ENST00000549461 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
PKP2-206ENST00000549461 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
PKP2-206ENST00000549461 DDB1Q16531 1140 aa12.22□□□□□ -0.45
PKP2-206ENST00000549461 POTEAQ6S8J7 498 aa12.22□□□□□ -0.45
PKP2-206ENST00000549461 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
PKP2-206ENST00000549461 IL16Q14005 1332 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 A0A0G2JS52 829 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 E9PSI1 815 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 MYT1Q01538 1121 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
PKP2-206ENST00000549461 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
PKP2-206ENST00000549461 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
PKP2-206ENST00000549461 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
PKP2-206ENST00000549461 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
PKP2-206ENST00000549461 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
PKP2-206ENST00000549461 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
PKP2-206ENST00000549461 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
PKP2-206ENST00000549461 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
PKP2-206ENST00000549461 MRC1P22897 1456 aa12.2□□□□□ -0.46
PKP2-206ENST00000549461 CHL1O00533 1208 aa12.19□□□□□ -0.46
PKP2-206ENST00000549461 KCNQ3O43525 872 aa12.19□□□□□ -0.46
PKP2-206ENST00000549461 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
PKP2-206ENST00000549461 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
PKP2-206ENST00000549461 GNAI1P63096 354 aa12.18□□□□□ -0.46
PKP2-206ENST00000549461 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms