RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 PCDH11YQ9BZA8 1340 aa14.32□□□□□ -0.12
VDR-206ENST00000549336 ADGRB3O60242 1522 aa14.32□□□□□ -0.12
VDR-206ENST00000549336 ZNF335Q9H4Z2 1342 aaPredicted RBP14.31□□□□□ -0.12
VDR-206ENST00000549336 CCDC57Q2TAC2 916 aa14.31□□□□□ -0.12
VDR-206ENST00000549336 EYA1Q99502 592 aa14.31□□□□□ -0.12
VDR-206ENST00000549336 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
VDR-206ENST00000549336 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
VDR-206ENST00000549336 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
VDR-206ENST00000549336 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 AK7Q96M32 723 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 MPHOSPH8Q99549 860 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 TOMM22Q9NS69 142 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 REC8O95072 547 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 GCC1Q96CN9 775 aa14.3□□□□□ -0.12
VDR-206ENST00000549336 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
VDR-206ENST00000549336 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
VDR-206ENST00000549336 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
VDR-206ENST00000549336 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
VDR-206ENST00000549336 KIF3AQ9Y496 699 aa14.28□□□□□ -0.12
VDR-206ENST00000549336 BCAR3O75815 825 aa14.28□□□□□ -0.12
VDR-206ENST00000549336 ATP7BP35670 1465 aa14.28□□□□□ -0.12
VDR-206ENST00000549336 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.12
VDR-206ENST00000549336 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.12
VDR-206ENST00000549336 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
VDR-206ENST00000549336 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.12
VDR-206ENST00000549336 PTPRCP08575 1304 aa14.27□□□□□ -0.12
VDR-206ENST00000549336 FBXW7Q969H0 707 aa14.27□□□□□ -0.12
VDR-206ENST00000549336 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
VDR-206ENST00000549336 ABCA6Q8N139 1617 aa14.27□□□□□ -0.12
VDR-206ENST00000549336 PPP1R1BQ9UD71 204 aaPredicted RBP14.27□□□□□ -0.13
VDR-206ENST00000549336 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.13
VDR-206ENST00000549336 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
VDR-206ENST00000549336 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
VDR-206ENST00000549336 USP21Q9UK80 565 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
VDR-206ENST00000549336 PTPRMP28827 1452 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 MAP3K5Q99683 1374 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 RNF20Q5VTR2 975 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 ST18O60284 1047 aa14.26□□□□□ -0.13
VDR-206ENST00000549336 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
VDR-206ENST00000549336 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 BABAM1Q9NWV8 329 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 ZC3H13Q5T200 1668 aaKnown RBP14.25□□□□□ -0.13
VDR-206ENST00000549336 CLTCL1P53675 1640 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 MTHFSDQ2M296 383 aaKnown RBP14.25□□□□□ -0.13
VDR-206ENST00000549336 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 KIDINS220Q9ULH0 1771 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 CAMSAP1Q5T5Y3 1602 aa14.25□□□□□ -0.13
VDR-206ENST00000549336 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 RARSP54136 660 aaKnown RBP14.24□□□□□ -0.13
VDR-206ENST00000549336 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 SSH1Q8WYL5 1049 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 APPP05067 770 aa14.24□□□□□ -0.13
VDR-206ENST00000549336 KDM5AP29375 1690 aaKnown RBP14.24□□□□□ -0.13
VDR-206ENST00000549336 ADGRL3Q9HAR2 1447 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 CLTCQ00610 1675 aaKnown RBP14.23□□□□□ -0.13
VDR-206ENST00000549336 HIP1O00291 1037 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 RFC4P35249 363 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 TRDNQ13061 729 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 DDX17Q92841 729 aaKnown RBP14.23□□□□□ -0.13
VDR-206ENST00000549336 IL13P35225 146 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 LRRIQ1Q96JM4 1722 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 FLIIQ13045 1269 aa14.23□□□□□ -0.13
VDR-206ENST00000549336 FAM83GA6ND36 823 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 INTS3Q68E01 1043 aaKnown RBP14.22□□□□□ -0.13
VDR-206ENST00000549336 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 CNTROBQ8N137 903 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 ATP6V1AP38606 617 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 CPLX2Q6PUV4 134 aaKnown RBP14.22□□□□□ -0.13
VDR-206ENST00000549336 PPP1R42Q7Z4L9 355 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 MYD88Q99836 296 aa14.22□□□□□ -0.13
VDR-206ENST00000549336 TRMT112Q9UI30 125 aaKnown RBP14.22□□□□□ -0.13
VDR-206ENST00000549336 NBPF14Q5TI25 921 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 KIF24Q5T7B8 1368 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 USP6P35125 1406 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 RSPH6AQ9H0K4 717 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 CEP152O94986 1710 aa14.21□□□□□ -0.13
VDR-206ENST00000549336 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.14
VDR-206ENST00000549336 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
VDR-206ENST00000549336 TRPC5Q9UL62 973 aaPredicted RBP14.2□□□□□ -0.14
VDR-206ENST00000549336 INSRP06213 1382 aa14.2□□□□□ -0.14
VDR-206ENST00000549336 ANO8Q9HCE9 1232 aaPredicted RBP14.2□□□□□ -0.14
VDR-206ENST00000549336 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
VDR-206ENST00000549336 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
VDR-206ENST00000549336 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.2□□□□□ -0.14
VDR-206ENST00000549336 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
VDR-206ENST00000549336 ZNF772Q68DY9 489 aaPredicted RBP14.19□□□□□ -0.14
VDR-206ENST00000549336 BRINP3Q76B58 766 aa14.19□□□□□ -0.14
VDR-206ENST00000549336 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
VDR-206ENST00000549336 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms